RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ANAPC10Q9UM13 185 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 WASF3Q9UPY6 502 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 LILRA5A6NI73 299 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 IFITM10A6NMD0 228 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 PPYP01298 95 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 SNAI3Q3KNW1 292 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 WDR25Q64LD2 544 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 SLC25A47Q6Q0C1 308 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 ZNF574Q6ZN55 896 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 C1QL4Q86Z23 238 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 TERTO14746 1132 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 NRASP01111 189 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 IAPPP10997 89 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 TBC1D26Q86UD7 250 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 C8orf33Q9H7E9 229 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 MMP17Q9ULZ9 603 aa11.15□□□□□ -0.62
TRAPPC9-208ENST00000520857 DHHO43323 396 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SRPXP78539 464 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 RBMXL1Q96E39 390 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 PCDH15Q96QU1 1955 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A1W2PPQ1 181 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 A0A1W2PR80 420 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNHIT1O43257 154 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 TCN2P20062 427 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 GLIPR1P48060 266 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 HNRNPKP61978 463 aaKnown RBP eCLIP11.14□□□□□ -0.634e-6■□□□□ 8.7
TRAPPC9-208ENST00000520857 UNQ6494/PRO21346Q6UXR6 183 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 THOC3Q96J01 351 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 GPR87Q9BY21 358 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC7A10Q9NS82 523 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 TCAPO15273 167 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 FGF7P21781 194 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ERVS71-1P61550 626 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 H3F3AP84243 136 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 IZUMO4Q1ZYL8 232 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF774Q6NX45 483 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF66Q6ZN08 573 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 WDR5BQ86VZ2 330 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SIRT7Q9NRC8 400 aa11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 MAP1BP46821 2468 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-208ENST00000520857 SLC31A2O15432 143 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZFAND5O76080 213 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 FUT3P21217 361 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SUMO3P55854 103 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 ICAM4Q14773 271 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 PLPPR5Q32ZL2 321 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 TMEM171Q8WVE6 324 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 FAM131CQ96AQ9 280 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SHISA7A6NL88 538 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 GAPTQ8N292 157 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SGCZQ96LD1 299 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 PRDM13Q9H4Q3 707 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 DKKL1Q9UK85 242 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 AHCTF1Q8WYP5 2266 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SPEGQ15772 3267 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 PPP5D1E7EU14 171 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 PITX3O75364 302 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 SCGB1D1O95968 90 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 IL2RGP31785 369 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 ZNF100Q8IYN0 542 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 M1APQ8TC57 530 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 TM2D1Q9BX74 207 aa11.13□□□□□ -0.63
TRAPPC9-208ENST00000520857 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 RRP8O43159 456 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 B4GALT1P15291 398 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 CLN3Q13286 438 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 LRP11Q86VZ4 500 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 SCRT1Q9BWW7 348 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 ARV1Q9H2C2 271 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 H7BYZ3 331 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 CDS2O95674 445 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 IFNA1P01562 189 aa11.12□□□□□ -0.63
TRAPPC9-208ENST00000520857 IGHV3-9P01782 118 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms