RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 RD3LP0DJH9 198 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 MGMTP16455 207 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 PRRX1P54821 245 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 B2MP61769 119 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 HLXQ14774 488 aaPredicted RBP10.76□□□□□ -0.69
LIN54-210ENST00000510877 CTF1Q16619 201 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 ZNF324BQ6AW86 544 aaPredicted RBP10.76□□□□□ -0.69
LIN54-210ENST00000510877 CCDC190Q86UF4 302 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 Q8IYB0 196 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 OR13D1Q8NGV5 346 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 SPACA1Q9HBV2 294 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 ENY2Q9NPA8 101 aa10.76□□□□□ -0.69
LIN54-210ENST00000510877 OR2C1O95371 312 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 CNIH1O95406 144 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 GLAP06280 429 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 UBE2NLQ5JXB2 153 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 MOB3BQ86TA1 216 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 OR5M8Q8NGP6 311 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 RTN4RQ9BZR6 473 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 GAL3ST2Q9H3Q3 398 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 BABAM2Q9NXR7 383 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 KIAA1549LQ6ZVL6 1849 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 IGHV1-18A0A0C4DH31 117 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 ATG12O94817 140 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 CD80P33681 288 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 SNRPEP62304 92 aaKnown RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 RPL23AP62750 156 aaKnown RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 TMEM88Q6PEY1 159 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 MSRB3Q8IXL7 192 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 NPTNQ9Y639 398 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 TMEM82A0PJX8 343 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 LY6HO94772 140 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 FAHP16930 419 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 GABRB1P18505 474 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 AMY2BP19961 511 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 DHRS7BQ6IAN0 325 aaPredicted RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 SEZ6L2Q6UXD5 910 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 OR8G5Q8NG78 346 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 DVL3Q92997 716 aaPredicted RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 C4orf36Q96KX1 117 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 MRPL37Q9BZE1 423 aaKnown RBP10.75□□□□□ -0.69
LIN54-210ENST00000510877 SLC5A7Q9GZV3 580 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 PBOV1Q9GZY1 135 aa10.75□□□□□ -0.69
LIN54-210ENST00000510877 ZNF716A6NP11 495 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PF4P02776 101 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 TAGLN2P37802 199 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 PLA2G7Q13093 441 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 TNK1Q13470 666 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 NXNL2Q5VZ03 156 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 KCNRGQ8N5I3 272 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 OPALINQ96PE5 141 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 SLIRPQ9GZT3 109 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 SNRPGP15A8MWD9 76 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 MS4A18H0YCH9 400 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 M0R143 59 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 MT-ND4LP03901 98 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 FBP1P09467 338 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 B3GALT5-AS1P59052 145 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 MS4A18Q3C1V0 323 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 TEAD3Q99594 435 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 RAB18Q9NP72 206 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 DIMT1Q9UNQ2 313 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 E7EQL1 145 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PHF1O43189 567 aaPredicted RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 DIRAS3O95661 229 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 PF4V1P10720 104 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 ERGIC1Q969X5 290 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 ST6GAL2Q96JF0 529 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 SIGLEC11Q96RL6 698 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 NUDT16L1Q9BRJ7 211 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 ZNF385DQ9H6B1 395 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 LYRM2Q9NU23 88 aaPredicted RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 SLC25A10Q9UBX3 287 aaPredicted RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 CLDN16Q9Y5I7 305 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 DOPEY1Q5JWR5 2465 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PGA4P0DJD7 388 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PGA3P0DJD8 388 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 ELK1P19419 428 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 CDKN2AP42771 156 aaKnown RBP10.74□□□□□ -0.69
LIN54-210ENST00000510877 DAPP51397 102 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 PHYHIPQ92561 330 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 V9GY05 133 aa10.74□□□□□ -0.69
LIN54-210ENST00000510877 TMEM212A6NML5 194 aa10.73□□□□□ -0.69
LIN54-210ENST00000510877 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
LIN54-210ENST00000510877 NQO2P16083 231 aa10.73□□□□□ -0.69
LIN54-210ENST00000510877 POLR2IP36954 125 aaKnown RBP10.73□□□□□ -0.69
LIN54-210ENST00000510877 RPL31P62899 125 aaKnown RBP10.73□□□□□ -0.69
LIN54-210ENST00000510877 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms