RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 MYOZ1Q9NP98 299 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-205ENST00000505998 UBQLN4Q9NRR5 601 aa4.09□□□□□ -1.75
NIPBL-205ENST00000505998 ZNF221Q9UK13 617 aa4.09□□□□□ -1.75
NIPBL-205ENST00000505998 WDR45Q9Y484 360 aa4.09□□□□□ -1.75
NIPBL-205ENST00000505998 PRRC2CQ9Y520 2896 aaKnown RBP4.09□□□□□ -1.75
NIPBL-205ENST00000505998 MED12LQ86YW9 2145 aa4.09□□□□□ -1.76
NIPBL-205ENST00000505998 NBASA2RRP1 2371 aa4.09□□□□□ -1.76
NIPBL-205ENST00000505998 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 TCRBV3S1A0A5B6 114 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 LINC00862A6NCI5 91 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 A8MUA0 341 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 PPIAL4DF5H284 164 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 MKRN2OSH3BPM6 223 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 EIF4E2O60573 245 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 ICOSLGO75144 302 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 UBR5O95071 2799 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 AHSA1O95433 338 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 H6PDO95479 791 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 LGI1O95970 557 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 IGF2P01344 180 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 BCHEP06276 602 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 DBIP07108 87 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 CCL3P10147 92 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 KDELR2P33947 212 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 GABRA3P34903 492 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 CHI3L1P36222 383 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 ACVR1BP36896 505 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 CYB561P49447 251 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 AKR1D1P51857 326 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF136P52737 540 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 DEFA6Q01524 100 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 GK3PQ14409 553 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 GANABQ14697 944 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 TRAM2Q15035 370 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 SYPL1Q16563 259 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 DEFB109BQ30KR1 87 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 GLYR1Q49A26 553 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 SLC22A10Q63ZE4 541 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 TIGD3Q6B0B8 471 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 C16orf47Q6ZP98 133 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 RAI1Q7Z5J4 1906 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 INTS1Q8N201 2190 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 OR10G3Q8NGC4 313 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 OR10A6Q8NH74 314 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 AKR7LQ8NHP1 331 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 NANPQ8TBE9 248 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 MAGEE2Q8TD90 523 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 GPR151Q8TDV0 419 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 SPRYD4Q8WW59 207 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 S100ZQ8WXG8 99 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 MAL2Q969L2 176 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 ARHGDIGQ99819 225 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 TMEM246Q9BRR3 403 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 POLR2J2Q9GZM3 115 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 POLR2J3Q9H1A7 115 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 HMG20AQ9NP66 347 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 WARS2Q9UGM6 360 aaKnown RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 POMPQ9Y244 141 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 SLC35A3Q9Y2D2 325 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 KLF13Q9Y2Y9 288 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-205ENST00000505998 OR10H1Q9Y4A9 318 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 AP4S1Q9Y587 144 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 WIF1Q9Y5W5 379 aa4.08□□□□□ -1.76
NIPBL-205ENST00000505998 DOPEY1Q5JWR5 2465 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 RP1L1Q8IWN7 2480 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ISPDA4D126 451 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 RFPL4AA6NLU0 287 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 CENPXA8MT69 81 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 LEUTXA8MZ59 168 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 RFPL4AL1F8VTS6 287 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 H0Y8G0 127 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 K7EM74 188 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 WWP2O00308 870 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 TP53I11O14683 189 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 TPST2O60704 377 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 NPIPB7O75200 414 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ENTPD5O75356 428 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 LYPD3O95274 346 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 UTS2O95399 124 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 HPNP05981 417 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 LINC00614P0C842 121 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 DUX4L4P0CJ87 422 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 TRAPPC2P0DI81 140 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 TRAPPC2BP0DI82 140 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 PSKH1P11801 424 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF17P17021 662 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ATP6V1B2P21281 511 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ME2P23368 584 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ZBTB25P24278 435 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ELK4P28324 431 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 IL2RGP31785 369 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 RPL35P42766 123 aaKnown RBP4.07□□□□□ -1.76
NIPBL-205ENST00000505998 CRATP43155 626 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 TDGF1P3P51864 188 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 FBXW4P57775 412 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ESRRGP62508 458 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 SELENOWP63302 87 aa4.07□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF117Q03924 483 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms