RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CELP19835 753 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 COILP38432 576 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 PSMD7P51665 324 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 RAB25P57735 213 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 TAS2R43P59537 309 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 C1QTNF8P60827 252 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 MRPS15P82914 257 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 FAM3AP98173 230 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 MEF2CQ06413 473 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 MGAT3Q09327 533 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 SSX1Q16384 188 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 OGFRL1Q5TC84 451 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 TTC33Q6PID6 262 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 PAGE2Q7Z2X7 111 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 GALNT10Q86SR1 603 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 TMEM156Q8N614 296 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 OR4P4Q8NGL7 312 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 RNF133Q8WVZ7 376 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 SLC25A46Q96AG3 418 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 SMIM19Q96E16 107 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 FOPNLQ96NB1 174 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 PLA2G2FQ9BZM2 168 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 SLC19A3Q9BZV2 496 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 POMKQ9H5K3 350 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 DMAC2Q9NW81 257 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF223Q9UK11 482 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 POLR3HQ9Y535 204 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 ABCC2Q92887 1545 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 KIAA0586Q9BVV6 1533 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 ABCA5Q8WWZ7 1642 aa2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 PPRC1Q5VV67 1664 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-208ENST00000505553 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 IGKV6D-41A0A0C4DH26 115 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 FFAR1O14842 300 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 GYG2O15488 501 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF207O43670 478 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SSNA1O43805 119 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 STX10O60499 249 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 HLA-DQB1P01920 261 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF806P0C7X5 589 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SCGB1C2P0DMR2 95 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 M6PRP20645 277 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 PYCR1P32322 319 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 NUDT2P50583 147 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ATP5G2Q06055 141 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ELOCQ15369 112 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 TTMPQ5BVD1 217 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MORN3Q6PF18 240 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 DNM1P34Q6PK57 102 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 LINC00596Q86U02 117 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 PDPNQ86YL7 162 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 UBALD2Q8IYN6 164 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SAXO1Q8IYX7 474 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 OR8J2Q8NGG1 315 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 OR5H2Q8NGV7 314 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SCGB1C1Q8TD33 95 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 RNF157Q96PX1 679 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ANAPC13Q9BS18 74 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 FGFR1OP2Q9NVK5 253 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 TAS2R5Q9NYW4 299 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 PTPRGP23470 1445 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 EPRSP07814 1512 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ABCA10Q8WWZ4 1543 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MED1Q15648 1581 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 AHDC1Q5TGY3 1603 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MADDQ8WXG6 1647 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MAP3K4Q9Y6R4 1608 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 CUX1P39880 1505 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 YEATS2Q9ULM3 1422 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 BRD4O60885 1362 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 LRRN3E7EW58 273 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 H3BP45 60 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 M0QZ92 97 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 BIRC5O15392 142 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 MED6O75586 246 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 CYB5R3P00387 301 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 CA2P00918 260 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ADRA2AP08913 450 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 NELFEP18615 380 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 IMPA1P29218 277 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ACTR1BP42025 376 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 GOLGA7BQ2TAP0 167 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 LINC00303Q3SY05 128 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 COX19Q49B96 90 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF684Q5T5D7 378 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 GLYATQ6IB77 296 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 SPNS3Q6ZMD2 512 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 Q6ZR03 302 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 PRNTQ86SH4 94 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ITPRIPQ8IWB1 547 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 Q8N402 240 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 C2orf73Q8N5S3 287 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 OR2Z1Q8NG97 314 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF461Q8TAF7 563 aa2.51□□□□□ -2.01
TRAPPC13-208ENST00000505553 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms