RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IGHV7-4-1A0A0J9YVY3 117 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 RNASEK-C17orf49H0YIS7 233 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 RBFOX2O43251 390 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF207O43670 478 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCDC22O60826 627 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 MED6O75586 246 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 LDOC1O95751 146 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 CD8AP01732 235 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 UBE2KP61086 200 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 TSPAN5P62079 268 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 LRRC63Q05C16 580 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 GUSBP1Q15486 140 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ALX1Q15699 326 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 SLC25A35Q3KQZ1 300 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 KRT71Q3SY84 523 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 YIF1BQ5BJH7 314 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF684Q5T5D7 378 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 GUSBP11Q6P575 273 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 COMTD1Q86VU5 262 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 SLC34A3Q8N130 599 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 TTLQ8NG68 377 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR1L1Q8NH94 360 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ANGPTL6Q8NI99 470 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 RBMXL1Q96E39 390 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 SNF8Q96H20 258 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF430Q9H8G1 570 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 TMBIM4Q9HC24 238 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 EXOSC4Q9NPD3 245 aaKnown RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR2S2Q9NQN1 319 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 DDIT4Q9NX09 232 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 CD300AQ9UGN4 299 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ORC6Q9Y5N6 252 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 ELP1O95163 1332 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGSF9BQ9UPX0 1349 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 VPS13AQ96RL7 3174 aa3.33□□□□□ -1.88
HMGB1P3-201ENST00000502802 NDUFS5O43920 106 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ADRA2AP08913 450 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF806P0C7X5 589 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 GIMD1P0DJR0 217 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 C1GALT1C1LP0DN25 315 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ME2P23368 584 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 PSMB5P28074 263 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 OPRK1P41145 380 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 CXCL12P48061 93 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 PSMB2P49721 201 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF691Q5VV52 312 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 Q5W150 140 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF470Q6ECI4 717 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ERICH5Q6P6B1 374 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 UBALD1Q8TB05 177 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 SYNPRQ8TBG9 265 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 SFXN5Q8TD22 340 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 NEURL3Q96EH8 262 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 MRPL48Q96GC5 212 aaKnown RBP3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZFP3Q96NJ6 502 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 TMED9Q9BVK6 235 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 MAT2BQ9NZL9 334 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 CYB5R1Q9UHQ9 305 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 ANXA10Q9UJ72 324 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 FARSAQ9Y285 508 aaKnown RBP3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 KIAA1671Q9BY89 1806 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
HMGB1P3-201ENST00000502802 MYO10Q9HD67 2058 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 GATBO75879 557 aaKnown RBP3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGLV2-8P01709 118 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGLV3-25P01717 112 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 CISD3P0C7P0 127 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCL23P55773 120 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR2B6P58173 313 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 LAMTOR4Q0VGL1 99 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 C16orf72Q14CZ0 275 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 AP1ARQ63HQ0 302 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZFP1Q6P2D0 407 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 TIFABQ6ZNK6 161 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 UBALD2Q8IYN6 164 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR4M2Q8NGB6 313 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR51Q1Q8NH59 317 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 LINC01560Q8TB33 94 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 SERPINB11Q96P15 392 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 CYTH2Q99418 400 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 NUDT9Q9BW91 350 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 C12orf4Q9NQ89 552 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 ENOPH1Q9UHY7 261 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 Q9Y3F1 56 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 LRRC42Q9Y546 428 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 YTHDF2Q9Y5A9 579 aaKnown RBP3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 FRYLO94915 3013 aa3.31□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCDC171Q6TFL3 1326 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms