RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
CHTOP-206ENST00000495554 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
CHTOP-206ENST00000495554 RTN4IP1Q8WWV3 396 aaPredicted RBP12.73□□□□□ -0.37
CHTOP-206ENST00000495554 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
CHTOP-206ENST00000495554 CNTNAP3BQ96NU0 1288 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 CNTNAP3Q9BZ76 1288 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 SLC5A7Q9GZV3 580 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 TUBD1Q9UJT1 453 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 LIPGQ9Y5X9 500 aa12.73□□□□□ -0.37
CHTOP-206ENST00000495554 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 ACTL6AO96019 429 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 CD79AP11912 226 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 CCL2P13500 99 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 NPBWR2P48146 333 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 PRDX4Q13162 271 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 SRSF6Q13247 344 aaKnown RBP12.72□□□□□ -0.37
CHTOP-206ENST00000495554 C3AR1Q16581 482 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 RNFT1Q5M7Z0 435 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 C1orf185Q5T7R7 199 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
CHTOP-206ENST00000495554 NEU1Q99519 415 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 ZNF251Q9BRH9 671 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 NAA60Q9H7X0 242 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 DMXL1Q9Y485 3027 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 ZNF503-AS2A6NEH8 195 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 TAAR5O14804 337 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 SMPD2O60906 423 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 CST4P01036 141 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 RAB1AP62820 205 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 DAZAP2Q15038 168 aaPredicted RBP12.72□□□□□ -0.37
CHTOP-206ENST00000495554 PDCD1Q15116 288 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 SSX2Q16385 188 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 CEACAM21Q3KPI0 293 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 GGNBP1Q5YKI7 109 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 NANPQ8TBE9 248 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 TMED6Q8WW62 240 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 ZNF552Q9H707 407 aaPredicted RBP12.72□□□□□ -0.37
CHTOP-206ENST00000495554 STARD10Q9Y365 291 aa12.72□□□□□ -0.37
CHTOP-206ENST00000495554 APOC3P02656 99 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
CHTOP-206ENST00000495554 GLP1RP43220 463 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 UCP3P55916 312 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 SOX8P57073 446 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 FXYD4P59646 89 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
CHTOP-206ENST00000495554 PLP2Q04941 152 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 SLC10A1Q14973 349 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 TFAP2EQ6VUC0 442 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 TMEM200AQ86VY9 491 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 MOB3AQ96BX8 217 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 SYT3Q9BQG1 590 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.37
CHTOP-206ENST00000495554 URB1O60287 2271 aaKnown RBP12.71□□□□□ -0.38
CHTOP-206ENST00000495554 SS18L1O75177 396 aaPredicted RBP12.71□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF205O95201 554 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 CLN3Q13286 438 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 TMEM187Q14656 261 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 SMCO1Q147U7 214 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 FAM219AQ8IW50 185 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 FOXRED2Q8IWF2 684 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 DTD1Q8TEA8 209 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 MRPL24Q96A35 216 aaKnown RBP12.71□□□□□ -0.38
CHTOP-206ENST00000495554 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 OPA3Q9H6K4 179 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 SLC2A9Q9NRM0 540 aa12.71□□□□□ -0.38
CHTOP-206ENST00000495554 ZFHX4Q86UP3 3567 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 CNOT1A5YKK6 2376 aaKnown RBP12.7□□□□□ -0.38
CHTOP-206ENST00000495554 GPR37O15354 613 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 NKX2-8O15522 239 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 DEDDO75618 318 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 IGHV2-70P01814 119 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 HKR1P10072 659 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 CD46P15529 392 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 GPM6AP51674 278 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 BPIFCQ8NFQ6 507 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 HPSE2Q8WWQ2 592 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 EDARADDQ8WWZ3 215 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
CHTOP-206ENST00000495554 DEFB127Q9H1M4 99 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 ASCL3Q9NQ33 180 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 K7EPK0 472 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 FGF12P61328 243 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 EIF5AL1Q6IS14 154 aaKnown RBP12.7□□□□□ -0.38
CHTOP-206ENST00000495554 Q6ZPA2 131 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
CHTOP-206ENST00000495554 VASH2Q86V25 355 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 SLAMF9Q96A28 289 aa12.7□□□□□ -0.38
CHTOP-206ENST00000495554 DOCK7Q96N67 2140 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms