RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZNRF1Q8ND25 227 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 SDSLQ96GA7 329 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 CEP19Q96LK0 163 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 UQCC2Q9BRT2 126 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 RNF167Q9H6Y7 350 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 SIRT7Q9NRC8 400 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 PCDHB16Q9NRJ7 776 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 ONECUT1Q9UBC0 465 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 SLC25A10Q9UBX3 287 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 V9GY05 133 aa10.4□□□□□ -0.74
SEC61A1-206ENST00000491668 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.75
SEC61A1-206ENST00000491668 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SMIM30A4D0T7 59 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 CDRT1O95170 752 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 CSTBP04080 98 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 PGA5P0DJD9 388 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SDC2P34741 201 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 IER3P46695 156 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 CAV3P56539 151 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 VBP1P61758 197 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SRSF4Q08170 494 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 KLRD1Q13241 179 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 HCP5Q6MZN7 132 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 ACP7Q6ZNF0 438 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 RNF144BQ7Z419 303 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SAXO1Q8IYX7 474 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 CD177Q8N6Q3 437 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 KIR3DL3Q8N743 410 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 ZSCAN4Q8NAM6 433 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 SGMS2Q8NHU3 365 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 H1FXQ92522 213 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 EMG1Q92979 244 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 MED30Q96HR3 178 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 METTL9Q9H1A3 318 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 RASL12Q9NYN1 266 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 C1RLQ9NZP8 487 aa10.39□□□□□ -0.75
SEC61A1-206ENST00000491668 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 HTR3BO95264 441 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 BCL3P20749 454 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 HTR2CP28335 458 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 GABRA2P47869 451 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 SERPINB10P48595 397 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 ZP1P60852 638 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 GPR176Q14439 515 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 RAB11BQ15907 218 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 SLC22A6Q4U2R8 563 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 PRR31Q5SQ13 230 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 GLIPR1L1Q6UWM5 242 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 PXT1Q8NFP0 134 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 SSMEM1Q8WWF3 244 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 NRIP2Q9BQI9 281 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 NAA50Q9GZZ1 169 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 C19orf12Q9NSK7 152 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 GLS2Q9UI32 602 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 MMP24Q9Y5R2 645 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 POMT1Q9Y6A1 747 aa10.38□□□□□ -0.75
SEC61A1-206ENST00000491668 A0A1W2PRD5 423 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 A0A1W2PRF3 423 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 A0A1W2PRM7 423 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 RFPL4AA6NLU0 287 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 RFPL4AL1F8VTS6 287 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 F8VVB4 439 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 F8VWA3 439 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 SLC17A2O00624 439 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 GPR137BO60478 399 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 NOS1APO75052 506 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 KDM4BO94953 1096 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 GABARAPO95166 117 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 UBBP0CG47 229 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 CALCBP10092 127 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 NDUFB7P17568 137 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 PRKACAP17612 351 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 SERPINA2P20848 420 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 NPBWR2P48146 333 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 BMXP51813 675 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 TMBIM6P55061 237 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 RAG2P55895 527 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 OR10A3P58181 314 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 NCS1P62166 190 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 BLMHQ13867 455 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 TAF9Q16594 264 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 C1orf100Q5SVJ3 147 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 HES5Q5TA89 166 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
SEC61A1-206ENST00000491668 FAM58AQ8N1B3 248 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms