RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 COMMD3Q9UBI1 195 aa10.98□□□□□ -0.65
HDAC1-208ENST00000482310 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 UBE2QL1A1L167 161 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-208ENST00000482310 SOCS1O15524 211 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 ZNF737O75373 536 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 INHBBP09529 407 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 CD99P14209 185 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-208ENST00000482310 CPT2P23786 658 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 MPV17LQ2QL34 196 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 MOGAT2Q3SYC2 334 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 NHLRC3Q5JS37 347 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 RAB12Q6IQ22 244 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 C17orf107Q6ZR85 190 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 BTN2A1Q7KYR7 527 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 GDPD3Q7L5L3 318 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 CROCCP3Q8IVE0 287 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 LINC01356Q8N9X3 169 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 Q8NFD4 153 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 MSI2Q96DH6 328 aaKnown RBP10.97□□□□□ -0.65
HDAC1-208ENST00000482310 C18orf12Q96KH6 178 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 BCL7BQ9BQE9 202 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 DPCDQ9BVM2 203 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-208ENST00000482310 KAAG1Q9UBP8 84 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 RAB22AQ9UL26 194 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 PEX16Q9Y5Y5 336 aa10.97□□□□□ -0.65
HDAC1-208ENST00000482310 NAV3Q8IVL0 2385 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 LOC105371242A0A075B767 164 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SMIM31A0A1B0GVY4 71 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 A0A1W2PQ09 198 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 C22orf46C9J442 243 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 K7N7A8 449 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 LDLRAD4O15165 306 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 FOXH1O75593 365 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 TGFAP01135 160 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 MSMBP08118 114 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-208ENST00000482310 CFPP27918 469 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 BLVRBP30043 206 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SOX6P35712 828 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 GZMKP49863 264 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 NPY4RP50391 375 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 AESQ08117 197 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SIGIRRQ6IA17 410 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 Q71RC1 249 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-208ENST00000482310 C6orf201Q7Z4U5 140 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 LINC00596Q86U02 117 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 BIVMQ86UB2 503 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 OR8H2Q8N162 312 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SAMD12Q8N8I0 201 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 CHST4Q8NCG5 386 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 PLPPR1Q8TBJ4 325 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 DYNC2LI1Q8TCX1 351 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 MRPS24Q96EL2 167 aaKnown RBP10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SNX22Q96L94 193 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 NEDD4LQ96PU5 975 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 SHARPINQ9H0F6 387 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 MMP26Q9NRE1 261 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 C19orf12Q9NSK7 152 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 RHBDL2Q9NX52 303 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 ONECUT1Q9UBC0 465 aa10.96□□□□□ -0.65
HDAC1-208ENST00000482310 TRAV39A0A0B4J263 110 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 B4DSR2 109 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 PDCD6O75340 191 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 RAB6AP20340 208 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 RANBP1P43487 201 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 KRBOX4Q5JUW0 171 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 CYB5R2Q6BCY4 276 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 TRAPPC6BQ86SZ2 158 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 IZUMO1Q8IYV9 350 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 PPP1R35Q8TAP8 253 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 SLC25A38Q96DW6 304 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 SULT4A1Q9BR01 284 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 NUDT16L1Q9BRJ7 211 aaKnown RBP10.95□□□□□ -0.66
HDAC1-208ENST00000482310 DCTN5Q9BTE1 182 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 TM2D1Q9BX74 207 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 ZMAT3Q9HA38 289 aaKnown RBP10.95□□□□□ -0.66
HDAC1-208ENST00000482310 HIF1ANQ9NWT6 349 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 ABRACLQ9P1F3 81 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 ETV7Q9Y603 341 aa10.95□□□□□ -0.66
HDAC1-208ENST00000482310 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 A8MXK9 166 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 MGST3O14880 152 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 RGS5O15539 181 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 HPGDSO60760 199 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 GNB3P16520 340 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 FUT3P21217 361 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 CHATP28329 748 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 GLIPR1P48060 266 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 RPL31P62899 125 aaKnown RBP10.94□□□□□ -0.66
HDAC1-208ENST00000482310 PRB3Q04118 309 aaPredicted RBP10.94□□□□□ -0.66
HDAC1-208ENST00000482310 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 DCAF12L2Q5VW00 463 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 OLFML2AQ68BL7 652 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 GLCCI1Q86VQ1 547 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 CMTM4Q8IZR5 234 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 OR56B1Q8NGI3 324 aa10.94□□□□□ -0.66
HDAC1-208ENST00000482310 OR5D13Q8NGL4 314 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms