RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 UNC50Q53HI1 259 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 SYT14P1Q58G82 188 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 CD276Q5ZPR3 534 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 TMEM215Q68D42 235 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 C12orf54Q6X4T0 127 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 CALHM3Q86XJ0 350 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 OR8I2Q8N0Y5 310 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 OR52L1Q8NGH7 329 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 CRYGNQ8WXF5 182 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 SLC7A6Q92536 515 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 LRRC58Q96CX6 371 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 CCDC115Q96NT0 180 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 IL17FQ96PD4 163 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 NEDD4LQ96PU5 975 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 SYT3Q9BQG1 590 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF436Q9C0F3 470 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 SFXN1Q9H9B4 322 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 SAP30LQ9HAJ7 183 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 TAF9BQ9HBM6 251 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 UBQLN4Q9NRR5 601 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 IDI2-AS1Q9NZ38 188 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 FBLN5Q9UBX5 448 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 FZR1Q9UM11 496 aa5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 CARHSP1Q9Y2V2 147 aaKnown RBP5.2□□□□□ -1.58
SMARCE1-208ENST00000474246 PCNX2A6NKB5 2137 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 KAT6AQ92794 2004 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 TP53BP1Q12888 1972 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 KIF26AQ9ULI4 1882 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 ADAMTS9Q9P2N4 1935 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 ATP6AP2A0A1C7CYW4 349 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 A0A1W2PPI3 338 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 TRIM49D1C9J1S8 452 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 MFNGO00587 321 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 GCM2O75603 506 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 CD2P06729 351 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 UMODP07911 640 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 ADORA3P0DMS8 318 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 PSG2P11465 335 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 CHRNB4P30926 498 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 GLRXP35754 106 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 AVPR1BP47901 424 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 GLIPR1P48060 266 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 RFX2P48378 723 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 GPR18Q14330 331 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 IGFBP7Q16270 282 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 C2orf68Q2NKX9 166 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 HBMQ6B0K9 141 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 CHMP1BQ7LBR1 199 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 CMC1Q7Z7K0 106 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 TCTEX1D1Q8N7M0 179 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 WDR31Q8NA23 367 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 OR5A2Q8NGI9 324 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 DOK4Q8TEW6 326 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 OR52B2Q96RD2 323 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 CLCC1Q96S66 551 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 GFI1Q99684 422 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 NRIP2Q9BQI9 281 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 EBPLQ9BY08 206 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 PRO1933Q9H354 126 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 SRMSQ9H3Y6 488 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 ACOT13Q9NPJ3 140 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 TAS2R16Q9NYV7 291 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 LSM7Q9UK45 103 aaKnown RBP5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 PILRAQ9UKJ1 303 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 WDR83OSQ9Y284 106 aa5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMARCE1-208ENST00000474246 DAPL1A0PJW8 107 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 J3KR12 359 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 J3QR06 171 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 RGS16O15492 202 aaPredicted RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 PRKNO60260 465 aaPredicted RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 ZIC3O60481 467 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 KCNK2O95069 426 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 C1orf105O95561 183 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 APOA2P02652 100 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 SEMG1P04279 462 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 MYL12AP19105 171 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 MYL9P24844 172 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 NPY1RP25929 384 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 RPL4P36578 427 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 AMTP48728 403 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 VAMP7P51809 220 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 PDX1P52945 283 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 HILS1P60008 231 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 PLK5Q496M5 336 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 PRSS36Q5K4E3 855 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 C1orf195Q5TG92 126 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 TEX36Q5VZQ5 186 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 SPSB3Q6PJ21 355 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 SLC25A48Q6ZT89 311 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 SVBPQ8N300 66 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 TMEM99Q8N816 258 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 RNF149Q8NC42 400 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 TMEM52Q8NDY8 209 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF548Q8NEK5 533 aaPredicted RBP5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 OR2G2Q8NGZ5 317 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 OR2M4Q96R27 311 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 F2RL3Q96RI0 385 aa5.18□□□□□ -1.58
SMARCE1-208ENST00000474246 GABRG3Q99928 467 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms