RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 FAM25CB3EWG5 89 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 FAM25GB3EWG6 89 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 FAM229AH3BQW9 127 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 K7N7A8 449 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 MFNGO00587 321 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CTDSPLO15194 276 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 NDUFA2O43678 99 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 LANCL1O43813 399 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 ORC5O43913 435 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 SSX5O60225 188 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CA11O75493 328 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 HAND1O96004 215 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GSTP1P09211 210 aaKnown RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L2P0CJ85 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L3P0CJ86 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L4P0CJ87 422 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L5P0CJ88 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L6P0CJ89 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L7P0CJ90 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CGB3P0DN86 165 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CGB7P0DN87 165 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 IRF2P14316 349 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 HIST1H1DP16402 221 aaKnown RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 ATF4P18848 351 aaPredicted RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 CPT2P23786 658 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GABRR1P24046 479 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 S100A5P33763 92 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GABRA2P47869 451 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 PPP5CP53041 499 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 SNU13P55769 128 aaKnown RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 ATP5J2P56134 94 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 TAS2R20P59543 309 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 LMO4P61968 165 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 IFITM3Q01628 133 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 MADCAM1Q13477 382 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 BAK1Q16611 211 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CR1LQ2VPA4 569 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DEFB113Q30KQ7 82 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 SPIN3Q5JUX0 258 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 SAMD5Q5TGI4 173 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 HACD4Q5VWC8 232 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 PYHIN1Q6K0P9 492 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4L9Q6RFH8 374 aaPredicted RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 Q6ZPA2 131 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 C5orf24Q7Z6I8 188 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 LINC00596Q86U02 117 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 C1orf87Q8N0U7 546 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 LRRC75A-AS1Q8N1F1 130 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GAPTQ8N292 157 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 ZNF525Q8N782 197 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CHST4Q8NCG5 386 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 ZNRF1Q8ND25 227 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GPX8Q8TED1 209 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 C10orf105Q8TEF2 133 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DYRK2Q92630 601 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 RAB1CQ92928 201 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 RAB3CQ96E17 227 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 MED30Q96HR3 178 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 SNX22Q96L94 193 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 GAFA1Q96PS6 74 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 NEDD4LQ96PU5 975 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 CITED4Q96RK1 184 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 DNTTIP1Q9H147 329 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 PLEKHJ1Q9NW61 149 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 BEX4Q9NWD9 120 aaPredicted RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 DUX4Q9UBX2 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 PDZD2O15018 2839 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 APCP25054 2843 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ARFGEF3Q5TH69 2177 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 RAI1Q7Z5J4 1906 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 UBE2QL1A1L167 161 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 CLDN25C9JDP6 229 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 MCRIP1C9JLW8 97 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 H3BUI4 141 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 SIRPB1O00241 398 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 SIGLEC5O15389 551 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PPIHO43447 177 aaKnown RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 GSTZ1O43708 216 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 PDCD6O75340 191 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 SCGNO76038 276 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 OR7C1O76099 320 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 NAPSAO96009 420 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 TK1P04183 234 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 NAT1P18440 290 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ERP29P30040 261 aaKnown RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 PRSS3P35030 304 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 NR4A2P43354 598 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 OR3A1P47881 315 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 GLIPR1P48060 266 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 BTG1P62324 171 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PITPNAQ00169 270 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PAX5Q02548 391 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 AESQ08117 197 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 IKZF1Q13422 519 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PNLIPRP3Q17RR3 467 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 SMIM21Q3B7S5 101 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 TMEM155Q4W5P6 130 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ATAD3CQ5T2N8 411 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 AVPI1Q5T686 147 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms