RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PIGYQ3MUY2 71 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 C1orf229Q6ZS94 237 aaPredicted RBP15.75■□□□□ 0.11
USP11-205ENST00000467378 ASCC1Q8N9N2 400 aaKnown RBP15.75■□□□□ 0.11
USP11-205ENST00000467378 OR6M1Q8NGM8 313 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 OR13F1Q8NGS4 319 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 C8orf46Q8TAG6 207 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 RNF167Q9H6Y7 350 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 OPN4Q9UHM6 478 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 ST3GAL6Q9Y274 331 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 TRRAPQ9Y4A5 3859 aa15.75■□□□□ 0.11
USP11-205ENST00000467378 LOC100506127A0A0U1RQW1 187 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 SIRPB1O00241 398 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 DEGS1O15121 323 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 ENSAO43768 121 aaKnown RBP15.74■□□□□ 0.11
USP11-205ENST00000467378 TFAP2AP05549 437 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 LIPFP07098 398 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 UBBP0CG47 229 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 GTF2F2P13984 249 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 RAB3BP20337 219 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 RBM11P57052 281 aaKnown RBP15.74■□□□□ 0.11
USP11-205ENST00000467378 SCN1BQ07699 218 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 BTNL3Q6UXE8 466 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 GDPGP1Q6ZNW5 385 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 TMEM104Q8NE00 496 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 OR4S1Q8NGB4 309 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 H1FXQ92522 213 aaKnown RBP15.74■□□□□ 0.11
USP11-205ENST00000467378 MRPS24Q96EL2 167 aaKnown RBP15.74■□□□□ 0.11
USP11-205ENST00000467378 DMRTB1Q96MA1 342 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 CENPOQ9BU64 300 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 C7orf69Q9H7B7 122 aa15.74■□□□□ 0.11
USP11-205ENST00000467378 SLC33A1O00400 549 aaPredicted RBP15.73■□□□□ 0.11
USP11-205ENST00000467378 VSIG8P0DPA2 414 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 ZNF44P15621 663 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 ALDH3B2P48448 385 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 OR10A3P58181 314 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 TPRA1Q86W33 373 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 NR2C2APQ86WQ0 139 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 OR8H2Q8N162 312 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 CHST4Q8NCG5 386 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 OR5D13Q8NGL4 314 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 KCTD7Q96MP8 289 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 BANF2Q9H503 90 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 PLGRKTQ9HBL7 147 aa15.73■□□□□ 0.11
USP11-205ENST00000467378 GEMIN2O14893 280 aaKnown RBP15.72■□□□□ 0.11
USP11-205ENST00000467378 AIREO43918 545 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 CRTAPO75718 401 aaPredicted RBP15.72■□□□□ 0.11
USP11-205ENST00000467378 PPIAL4GP0DN37 164 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 MGMTP16455 207 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 GABRR1P24046 479 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 OR3A1P47881 315 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 QRFPP83859 136 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 TIMM50Q3ZCQ8 353 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 LINC00596Q86U02 117 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 PPP1R35Q8TAP8 253 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 FUNDC2Q9BWH2 189 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 CHST6Q9GZX3 395 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 IFT22Q9H7X7 185 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 C19orf12Q9NSK7 152 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 ZNF581Q9P0T4 197 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 AUP1Q9Y679 476 aa15.72■□□□□ 0.11
USP11-205ENST00000467378 TRBV23-1A0A0A0MS06 115 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 TRAV24A0A0B4J272 114 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 TMEM14DPA8MWL7 114 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 MGST3O14880 152 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 BPNT1O95861 308 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 SDC2P34741 201 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 FOXL1Q12952 345 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 UNC119Q13432 240 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 P2RY14Q15391 338 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 GRK1Q15835 563 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 RAB11BQ15907 218 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 TAF9Q16594 264 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 MPV17LQ2QL34 196 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 HES5Q5TA89 166 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 OR10K2Q6IF99 312 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 METAP1DQ6UB28 335 aaPredicted RBP15.71■□□□□ 0.11
USP11-205ENST00000467378 OR4M1Q8NGD0 313 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 MRI1Q9BV20 369 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 SUCNR1Q9BXA5 334 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 SELENOIQ9C0D9 397 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 CST11Q9H112 138 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 KCNK15Q9H427 330 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 STEAP1Q9UHE8 339 aa15.71■□□□□ 0.11
USP11-205ENST00000467378 IFITM5A6NNB3 132 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 ARSBP15848 533 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 TGFBR1P36897 503 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 CLDN12P56749 244 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 ARF6P62330 175 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 RPL31P62899 125 aaKnown RBP15.7■□□□□ 0.1
USP11-205ENST00000467378 TMEM200BQ69YZ2 307 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 HIST2H2BDQ6DRA6 164 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 GDPD3Q7L5L3 318 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 OR51D1Q8NGF3 324 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 KCNG3Q8TAE7 436 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 FAM46BQ96A09 425 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 Q96M66 194 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 SIRPDQ9H106 197 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 PPA2Q9H2U2 334 aa15.7■□□□□ 0.1
USP11-205ENST00000467378 SMIM30A4D0T7 59 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A10PA6NDY2 464 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms