RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CD1A	P06126	327 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	MELTF	P08582	738 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	CCL3L1	P16619	93 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	IGFBP3	P17936	291 aa	Predicted RBP	10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	COX7A1	P24310	79 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	PSMB9	P28065	219 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	BMX	P51813	675 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	RPL15	P61313	204 aa	Known RBP	10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	MLLT11	Q13015	90 aa	Predicted RBP	10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF273	Q14593	569 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	PIGY	Q3MUY2	71 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	HSD17B12	Q53GQ0	312 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF529	Q6P280	563 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	LDLRAD3	Q86YD5	345 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	KIR3DL3	Q8N743	410 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	LY6G5B	Q8NDX9	201 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	PXT1	Q8NFP0	134 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	OR5D13	Q8NGL4	314 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	NEK7	Q8TDX7	302 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	IGHV1-69D	A0A0B4J2H0	117 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507		M0R1W7	72 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	PSPN	O60542	156 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	IGHV1-69	P01742	117 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	MDK	P21741	143 aa	Predicted RBP	10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF146	Q15072	292 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	PAN3	Q58A45	887 aa	Known RBP	10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	CRIP3	Q6Q6R5	217 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	METAP1D	Q6UB28	335 aa	Predicted RBP	10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	GLIPR1L1	Q6UWM5	242 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	OSR2	Q8N2R0	312 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	NKAIN3	Q8N8D7	197 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	OR4S1	Q8NGB4	309 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	C8orf46	Q8TAG6	207 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	TBC1D15	Q8TC07	691 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	METTL8	Q9H825	291 aa	Known RBP	10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	RHOF	Q9HBH0	211 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	ACOT13	Q9NPJ3	140 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	PCDHB16	Q9NRJ7	776 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	FAM96B	Q9Y3D0	163 aa		10.41	□□□□□ -0.74
FDPS-204	ENST00000461507	hADV38S2	A0JD32	116 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	FUOM	A2VDF0	154 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	FAM181B	A6NEQ2	426 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	MGST3	O14880	152 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	PIN1P1	O15428	100 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF737	O75373	536 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	CRTAP	O75718	401 aa	Predicted RBP	10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	OR7C1	O76099	320 aa	Predicted RBP	10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	PAH	P00439	452 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	CPE	P16870	476 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	PSMA1	P25786	263 aa	Known RBP	10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	OR3A1	P47881	315 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	RELB	Q01201	579 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	GUCA2A	Q02747	115 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	GPR50	Q13585	617 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	TRAM1	Q15629	374 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	ATAD3C	Q5T2N8	411 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	GLT8D1	Q68CQ7	371 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	NCR3LG1	Q68D85	454 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	TMEM200B	Q69YZ2	307 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	C17orf107	Q6ZR85	190 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	PNKD	Q8N490	385 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	SSMEM1	Q8WWF3	244 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	WFDC12	Q8WWY7	111 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	FAM46B	Q96A09	425 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF714	Q96N38	554 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	CHIA	Q9BZP6	476 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	ISYNA1	Q9NPH2	558 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	ST3GAL6	Q9Y274	331 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507	WNK1	Q9H4A3	2382 aa		10.4	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PP11	408 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	MEIOC	A2RUB1	952 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	MEGF11	A6BM72	1044 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	ZNF780A	O75290	641 aa	Predicted RBP	10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	ARL6IP5	O75915	188 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	GTF2F2	P13984	249 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	CALR	P27797	417 aa	Known RBP	10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	GABRA5	P31644	462 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	GLP1R	P43220	463 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	RAG2	P55895	527 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	P2RX3	P56373	397 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	ERVFRD-1	P60508	538 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	EMX1	Q04741	257 aa	Predicted RBP	10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	AES	Q08117	197 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	TPBG	Q13641	420 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	GPR176	Q14439	515 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	IL13RA2	Q14627	380 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	KRBOX4	Q5JUW0	171 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507		Q8N7P7	452 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	CHST4	Q8NCG5	386 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	OR4F5	Q8NH21	305 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	TAF15	Q92804	592 aa	Known RBP eCLIP	10.39	□□□□□ -0.75	2e-8	■■□□□ 12.7
FDPS-204	ENST00000461507	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	BANF2	Q9H503	90 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	PLGRKT	Q9HBL7	147 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	C1RL	Q9NZP8	487 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	CMYA5	Q8N3K9	4069 aa		10.39	□□□□□ -0.75
FDPS-204	ENST00000461507	TRGV10	A0A0A0MS01	117 aa		10.38	□□□□□ -0.75
FDPS-204	ENST00000461507		A0A0G2JK05	382 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms