RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 SNX22Q96L94 193 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 NEDD4LQ96PU5 975 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 C6orf62Q9GZU0 229 aaPredicted RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 FAM234AQ9H0X4 552 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 SPACA1Q9HBV2 294 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 PEX16Q9Y5Y5 336 aa8.46□□□□□ -1.06
UPF2-204ENST00000460569 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
UPF2-204ENST00000460569 FAM157AC9JC47 383 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 H3BUI4 141 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 K7N7A8 449 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 SOCS1O15524 211 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 RGS5O15539 181 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 PHF1O43189 567 aaPredicted RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 HPGDSO60760 199 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 FCN3O75636 299 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 TK1P04183 234 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 FUT3P21217 361 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 LMO1P25800 156 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 CHATP28329 748 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 NPY4RP50391 375 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 EDDM3AQ14507 147 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 MOGAT2Q3SYC2 334 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 WDR25Q64LD2 544 aaPredicted RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 SIGIRRQ6IA17 410 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 RAB12Q6IQ22 244 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 ZNF841Q6ZN19 808 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 GDPD3Q7L5L3 318 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 BIVMQ86UB2 503 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 BPIFB2Q8N4F0 458 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 FAM89BQ8N5H3 189 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 OR4S1Q8NGB4 309 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 MCFD2Q8NI22 146 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 PHF21AQ96BD5 680 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 DPCDQ9BVM2 203 aaPredicted RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 SLIRPQ9GZT3 109 aaKnown RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 LPAR2Q9HBW0 351 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 ING3Q9NXR8 418 aa8.45□□□□□ -1.06
UPF2-204ENST00000460569 RCC2Q9P258 522 aaKnown RBP8.45□□□□□ -1.06
UPF2-204ENST00000460569 YLPM1P49750 1951 aaKnown RBP8.44□□□□□ -1.06
UPF2-204ENST00000460569 A0A075B6Q4 140 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 UBE2QL1A1L167 161 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 A8MXK9 166 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 MCRIP1C9JLW8 97 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 MGST3O14880 152 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 FOXH1O75593 365 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 SCGNO76038 276 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 EIF4EP06730 217 aaKnown RBP8.44□□□□□ -1.06
UPF2-204ENST00000460569 EDDM3BP56851 147 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 LCN2P80188 198 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 RBM39Q14498 530 aaKnown RBP8.44□□□□□ -1.06
UPF2-204ENST00000460569 TMEM249Q2WGJ8 235 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 C6orf201Q7Z4U5 140 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 RTN4RL2Q86UN3 420 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 LAX1Q8IWV1 398 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 CMTM4Q8IZR5 234 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 OR5D13Q8NGL4 314 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 OR10R2Q8NGX6 335 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 RAB40AQ8WXH6 277 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 DYRK2Q92630 601 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 RAB3CQ96E17 227 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 ARHGAP5-AS1Q96IT6 56 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 CYYR1Q96J86 154 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 PECRQ9BY49 303 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 SHARPINQ9H0F6 387 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 ABCG5Q9H222 651 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 PLEKHJ1Q9NW61 149 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 DSCAML1Q8TD84 2053 aa8.44□□□□□ -1.06
UPF2-204ENST00000460569 MAP1AP78559 2803 aaPredicted RBP8.44□□□□□ -1.06
UPF2-204ENST00000460569 TEX15Q9BXT5 2789 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 A0A1W2PQ09 198 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 FOXI3A8MTJ6 420 aaPredicted RBP8.43□□□□□ -1.06
UPF2-204ENST00000460569 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
UPF2-204ENST00000460569 C22orf46C9J442 243 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 RAB27BO00194 218 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 CTDSP2O14595 271 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 GPR37O15354 613 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 APOA1P02647 267 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 CSN2P05814 226 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 ELK1P19419 428 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 CDK2P24941 298 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 ZFP36P26651 326 aaKnown RBP8.43□□□□□ -1.06
UPF2-204ENST00000460569 KCNJ3P48549 501 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 GZMKP49863 264 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 P2RX3P56373 397 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 TMEM50BP56557 158 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 AESQ08117 197 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 CNPY1Q3B7I2 92 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 PLAC9Q5JTB6 97 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 KRBOX4Q5JUW0 171 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1178.8 ms