RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 FBXW12Q6X9E4 464 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 Q6ZRG5 221 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 BOLLQ8N9W6 283 aaKnown RBP10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 OR8G5Q8NG78 346 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 DYRK2Q92630 601 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 POM121L2Q96KW2 1035 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 HIPK2Q9H2X6 1198 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 ZNF442Q9H7R0 627 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 GP6Q9HCN6 339 aa10.75□□□□□ -0.69
ECHDC1-209ENST00000454591 OR7C1O76099 320 aaPredicted RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 FOLR2P14207 255 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 UCP1P25874 307 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 GNRHRP30968 328 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SNCAP37840 140 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 RFC3P40938 356 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 NPBWR1P48145 328 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 NPBWR2P48146 333 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 ARHGDIBP52566 201 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 AKR1C2P52895 323 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 FXYD4P59646 89 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 AKR1C1Q04828 323 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SP6Q3SY56 376 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 PHLDA2Q53GA4 152 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 KIRREL1Q96J84 757 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 LOXL4Q96JB6 756 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SIGLEC12Q96PQ1 595 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 TTTY12Q9BZ98 90 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 PKIBQ9C010 78 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 EGLN1Q9GZT9 426 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 WFDC1Q9HC57 220 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 LUZP4Q9P127 313 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 MPC1Q9Y5U8 109 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 ATP23Q9Y6H3 246 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 OR5B21A6NL26 309 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 PHF1O43189 567 aaPredicted RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SFTA3P0C7M3 94 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SLC25A6P12236 298 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 PVALBP20472 110 aaPredicted RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 BCL3P20749 454 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SPINK14Q6IE38 97 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 MRPL21Q7Z2W9 205 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 FOXRED2Q8IWF2 684 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 LFNGQ8NES3 379 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 OR5L1Q8NGL2 311 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 BOD1Q96IK1 185 aa10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 USB1Q9BQ65 265 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-209ENST00000454591 ARHGAP21Q5T5U3 1957 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 FAM221AA4D161 298 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 TRAPPC2LH3BP13 241 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 PITX3O75364 302 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 TK1P04183 234 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 JMJD7P0C870 316 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 PRSS12P56730 875 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 IL24Q13007 206 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 GNMTQ14749 295 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 NMSQ5H8A3 153 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 DCAF10Q5QP82 559 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 TUSC5Q8IXB3 177 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 SELENOHQ8IZQ5 122 aaKnown RBP10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 MDS2Q8NDY4 140 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 OR52M1Q8NGK5 317 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 OR11L1Q8NGX0 322 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 OR5P3Q8WZ94 311 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 APH1AQ96BI3 265 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 BSCL2Q96G97 398 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 CABLES2Q9BTV7 478 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 PAPOLGQ9BWT3 736 aaKnown RBP10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 PRRG4Q9BZD6 226 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 TUBA4BQ9H853 241 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 MTCH1Q9NZJ7 389 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 CACFD1Q9UGQ2 172 aa10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 KLF13Q9Y2Y9 288 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-209ENST00000454591 SHANK1Q9Y566 2161 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 SLC22A20A6NK97 555 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 K7N7A8 449 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 SCGB1D2O95969 90 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 MPLP40238 635 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 EWSR1Q01844 656 aaKnown RBP eCLIP10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 ID3Q02535 119 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 PEA15Q15121 130 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 OR1C1Q15619 314 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 IGSF11Q5DX21 431 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 FAM76BQ5HYJ3 339 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 SHEQ5VZ18 495 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 SP5Q6BEB4 398 aaPredicted RBP10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 BRICD5Q6PL45 260 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 OR2C3Q8N628 320 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 TMEM251Q8N6I4 163 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 TMEM105Q8N8V8 129 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 SLAMF9Q96A28 289 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 TREM2Q9NZC2 230 aa10.72□□□□□ -0.69
ECHDC1-209ENST00000454591 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms