RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CFAP77Q6ZQR2 320 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 H1FNTQ75WM6 255 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 C16orf82Q7Z2V1 217 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ARPINQ7Z6K5 226 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 LINC00596Q86U02 117 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 GCSAMQ8N6F7 178 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 TMEM217Q8N7C4 229 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 RNASE11Q8TAA1 199 aaKnown RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 PSMA8Q8TAA3 256 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 LIPHQ8WWY8 451 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 TAAR8Q969N4 342 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ERGIC1Q969X5 290 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 SLC41A3Q96GZ6 507 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF582Q96NG8 517 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ELOVL1Q9BW60 279 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 OR51M1Q9H341 326 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 RIBC2Q9H4K1 309 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 SLCO1B3Q9NPD5 702 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 KRCC1Q9NPI7 259 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 NINJ2Q9NZG7 142 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 STUB1Q9UNE7 303 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 IGKV1D-42A0A075B6H8 117 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 A0A087WUJ7 227 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 MEX3AA1L020 520 aaKnown RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 MFSD2BA6NFX1 497 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF729A6NN14 1252 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ODF3BA8MYP8 253 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 OR11H12B2RN74 326 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 J3QRK9 145 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TCAPO15273 167 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TGOLN2O43493 480 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 DENRO43583 198 aaKnown RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 RGS11O94810 467 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TNFAIP8O95379 198 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CD3GP09693 182 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 STAG3L3P0CL85 134 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 P0DMU3 169 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 FAM231AP0DMU4 169 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 FAM231CP0DMU5 169 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 NR2C1P13056 603 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CCL3L1P16619 93 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CRABP1P29762 137 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CDAP32320 146 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ALDH3B2P48448 385 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 GBX2P52951 348 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 BIDP55957 195 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 GMFBP60983 142 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ISL1P61371 349 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ERVK-25P63136 954 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TRAM2Q15035 370 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 DGUOKQ16854 277 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 DEFB135Q30KP9 77 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 LCN1P1Q5VSP4 162 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 RSBN1Q5VWQ0 802 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ZFP1Q6P2D0 407 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TTC33Q6PID6 262 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 Q6ZTC4 211 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TRMT10CQ7L0Y3 403 aaKnown RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 GDPD3Q7L5L3 318 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SSX9Q7RTT3 188 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SLC36A1Q7Z2H8 476 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SLC35E3Q7Z769 313 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 LHFPL3Q86UP9 236 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 RANBP3LQ86VV4 465 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CLDN22Q8N7P3 220 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 OR52L2PQ8NGH6 319 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 OR5AK3PQ8NH89 298 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 BBS10Q8TAM1 723 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 PYDC1Q8WXC3 89 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 RFT1Q96AA3 541 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 PPCDCQ96CD2 204 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ZBTB18Q99592 522 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 OR2H1Q9GZK4 316 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 REEP4Q9H6H4 257 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 CCNB1IP1Q9NPC3 277 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SPAG4Q9NPE6 437 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SNTG1Q9NSN8 517 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ZDHHC18Q9NUE0 388 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TMEM100Q9NV29 134 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 NSMCE4AQ9NXX6 385 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 PTTG3PQ9NZH4 202 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ABCD2Q9UBJ2 740 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 AASSQ9UDR5 926 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 WARS2Q9UGM6 360 aaKnown RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF391Q9UJN7 358 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 RNF24Q9Y225 148 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 WDR45Q9Y484 360 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 TBL2Q9Y4P3 447 aaKnown RBP3.6□□□□□ -1.83
SDCBP-205ENST00000447267 SAR1BQ9Y6B6 198 aa3.6□□□□□ -1.83
SDCBP-205ENST00000447267 IGHV4OR15-8A0A075B7B6 117 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 A0A087WW49 117 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 A0A096LPI6 279 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 hCG_1807616A0A1W2PRN6 198 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 LINC00862A6NCI5 91 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 IQCF6A8MYZ5 107 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 DEFB4AO15263 64 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 AKR7A2O43488 359 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MED6O75586 246 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms