RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 H3BUI4 141 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 ATXN7O15265 892 aaPredicted RBP17.92■□□□□ 0.46
PTPRF-207ENST00000436724 NPY4RP50391 375 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 TAS2R46P59540 309 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 NKX6-1P78426 367 aaPredicted RBP17.92■□□□□ 0.46
PTPRF-207ENST00000436724 OVCH2Q7RTZ1 564 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 OR13G1Q8NGZ3 307 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 TERB2Q8NHR7 220 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A10PA6NDY2 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A18PA6NE21 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A16PA6NEW6 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A20PA6NIJ5 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A8PA6NJQ4 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A7PA6NKC0 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A22PA8MWA6 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A12PA8MX19 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A5PA8MXJ8 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A23PA8MXZ1 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A15PP0C7V4 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A13PP0C7W8 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A14PP0C7W9 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FAM90A24PP0C7X0 464 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 ZMYND11Q15326 602 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 C3orf36Q3SXR2 165 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 WFDC8Q8IUA0 241 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 ARRDC1Q8N5I2 433 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 MYOZ1Q9NP98 299 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-207ENST00000436724 KIF25Q9UIL4 384 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 ANXA10Q9UJ72 324 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 ZNF205O95201 554 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 CD40P25942 277 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 LY6G6FQ5SQ64 297 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 PRAMEF6Q5VXH4 476 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 C12orf45Q8N5I9 185 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-207ENST00000436724 CCDC107Q8WV48 283 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 SYT3Q9BQG1 590 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 PPA2Q9H2U2 334 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 C12orf4Q9NQ89 552 aa17.91■□□□□ 0.46
PTPRF-207ENST00000436724 RCC2Q9P258 522 aaKnown RBP17.91■□□□□ 0.46
PTPRF-207ENST00000436724 FXYD6-FXYD2A0A087WZ82 144 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 HS3ST1O14792 307 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 DTYMKP23919 212 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 ARPC4P59998 168 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 MPV17LQ2QL34 196 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 C1orf174Q8IYL3 243 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 ADAD2Q8NCV1 583 aaKnown RBP17.9■□□□□ 0.46
PTPRF-207ENST00000436724 TMEM171Q8WVE6 324 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 FXYD6Q9H0Q3 95 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 NARFLQ9H6Q4 476 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 UFSP2Q9NUQ7 469 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 OSGIN2Q9Y236 505 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 POLDIP2Q9Y2S7 368 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 THBDP07204 575 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 GLRXP35754 106 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 ERVK11-1P61568 191 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 BAMBIQ13145 260 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 AADACL3Q5VUY0 350 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 C11orf53Q8IXP5 236 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 RDH5Q92781 318 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 POM121Q96HA1 1249 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 PLK3Q9H4B4 646 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 SPEF1Q9Y4P9 236 aa17.9■□□□□ 0.46
PTPRF-207ENST00000436724 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.89■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM210A6NLX4 147 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 SLC34A2O95436 690 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 PGA5P0DJD9 388 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 CA7P43166 264 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 C5orf24Q7Z6I8 188 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 ST6GALNAC3Q8NDV1 305 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 SUN5Q8TC36 379 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 NEK7Q8TDX7 302 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 NRIP2Q9BQI9 281 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 CXXC4Q9H2H0 198 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 EDARQ9UNE0 448 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 TRAV24A0A0B4J272 114 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 PI3P19957 117 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 CASP6P55212 293 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 SORDQ00796 357 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 SNTB1Q13884 538 aaKnown RBP17.89■□□□□ 0.45
PTPRF-207ENST00000436724 C11orf88Q6PI97 169 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 LHFPL1Q86WI0 220 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 ZDHHC22Q8N966 263 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 SUMF2Q8NBJ7 301 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 OR2Z1Q8NG97 314 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 ARL6Q9H0F7 186 aa17.89■□□□□ 0.45
PTPRF-207ENST00000436724 TRAV14DV4A0A0A6YYC5 116 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 OR5H14A6NHG9 310 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 ZSCAN5BA6NJL1 495 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 A6NLC8 198 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 B3GALNT1O75752 331 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 NXPH2O95156 264 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 DHRS2Q13268 280 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM211Q6ICI0 200 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 SLC22A25Q6T423 547 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 REG4Q9BYZ8 158 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 WDR13Q9H1Z4 485 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 LIME1Q9H400 295 aa17.88■□□□□ 0.45
PTPRF-207ENST00000436724 CHMP1AQ9HD42 196 aaPredicted RBP17.88■□□□□ 0.45
PTPRF-207ENST00000436724 CHD3Q12873 2000 aaKnown RBP17.88■□□□□ 0.45
PTPRF-207ENST00000436724 ROS1P08922 2347 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms