RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HLA-DQA2P01906 255 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF728P0DKX0 622 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC25A6P12236 298 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF823P16415 610 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 EN2P19622 333 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 GLRA1P23415 457 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TSPOP30536 169 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 MC5RP33032 325 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC11A1P49279 550 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 CEBPDP49716 269 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SNU13P55769 128 aaKnown RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 UCP3P55916 312 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SEC11AP67812 179 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 HYAL1Q12794 435 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRSS53Q2L4Q9 553 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 CTXN3Q4LDR2 81 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TCTEX1D4Q5JR98 221 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 PLAC9Q5JTB6 97 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 C1orf140Q5VVS0 124 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF880Q6PDB4 577 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 DEFB128Q7Z7B8 93 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 LRP11Q86VZ4 500 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 C12orf76Q8N812 135 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR52N5Q8NH56 324 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 NINJ1Q92982 152 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 IL22RA2Q969J5 263 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ERGIC1Q969X5 290 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRGPRFQ96AM1 343 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 CNRIP1Q96F85 164 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC35A4Q96G79 324 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM56Q96MV1 263 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 GUCD1Q96NT3 240 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC46A1Q96NT5 459 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 YPEL2Q96QA6 119 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 RAB40CQ96S21 281 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ATP6V0BQ99437 205 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM204Q9BSN7 226 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 PARP12Q9H0J9 701 aaKnown RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10A2Q9H208 303 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZDHHC11Q9H8X9 412 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ELOVL3Q9HB03 270 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 B4GALT6Q9UBX8 382 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 CD84Q9UIB8 345 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 C19orf53Q9UNZ5 99 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 HS3ST2Q9Y278 367 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 LRP12Q9Y561 859 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TIMM9Q9Y5J7 89 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM56-RWDD3S4R434 201 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 NUP210Q8TEM1 1887 aaPredicted RBP4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A0U1RQK1 487 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 SERTM2A0A1B0GWG4 89 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 LOC107986453A0A1B0GWG9 222 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 IGLC7A0M8Q6 106 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 GAGE12BA1L429 117 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 BLACEA4D250 179 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 NKX2-6A6NCS4 301 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 AQP7P3A6NL99 342 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZFP92A6NM28 416 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC38A8A6NNN8 435 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 CXCL11O14625 94 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 TNFRSF10CO14798 259 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 DEGS1O15121 323 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 GRM6O15303 877 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMPRSS2O15393 492 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ERI3O43414 337 aaKnown RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 HCRTR1O43613 425 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF207O43670 478 aaKnown RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 HYPMO75409 117 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 STC2O76061 302 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 NUDT14O95848 222 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 CD160O95971 181 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 MT-ATP6P00846 226 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 HLA-DRB1P01911 266 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 CKMP06732 381 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 GNB3P16520 340 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAHP16930 419 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 AADACP22760 399 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 GJA4P35212 333 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF93P35789 620 aaPredicted RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 GPM6AP51674 278 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 HERV-K104P61576 105 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 RHOBP62745 196 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLAURQ03405 335 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 FOXF1Q12946 379 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 MMDQ15546 238 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR8B8Q15620 311 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 CD226Q15762 336 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ACKR1Q16570 336 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 MEP1BQ16820 701 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC22A6Q4U2R8 563 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 PSMG4Q5JS54 123 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 WDR25Q64LD2 544 aaPredicted RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 WBP2NLQ6ICG8 309 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 LCN10Q6JVE6 187 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 C22orf39Q6P5X5 142 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 VHLLQ6RSH7 139 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 SHISA2Q6UWI4 295 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 PARS2Q7L3T8 475 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms