RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PDCD1LG2Q9BQ51 273 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 BARHL1Q9BZE3 327 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 CHST6Q9GZX3 395 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 OR6C3Q9NZP0 311 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 EXOSC1Q9Y3B2 195 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 MEGF8Q7Z7M0 2845 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 IGHV2-26A0A0B4J1V2 119 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 E9PI62 339 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 OGG1O15527 345 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF44P15621 663 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 HTR1DP28221 377 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 EFNB2P52799 333 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 PRRX1P54821 245 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 ZP1P60852 638 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 BDH1Q02338 343 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 PAX5Q02548 391 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 HERPUD1Q15011 391 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 FAM189A2Q15884 450 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 LY6EQ16553 131 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 C2orf68Q2NKX9 166 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 Q6P435 159 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 ASCL4Q6XD76 172 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 LHFPL4Q7Z7J7 247 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 DHRSXQ8N5I4 330 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 OR4D6Q8NGJ1 314 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 OR51T1Q8NGJ9 327 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 TMEM80Q96HE8 168 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 GPER1Q99527 375 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 TMEM138Q9NPI0 162 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF281Q9Y2X9 895 aa11.75□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF729A6NN14 1252 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 SIRPB1O00241 398 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF780AO75290 641 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 BRS3P32247 399 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 CEACAM3P40198 252 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 CDK5R1Q15078 307 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 SLC16A12Q6ZSM3 486 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 TCF23Q7RTU1 214 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 Q8N2B8 174 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 RFT1Q96AA3 541 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 AKR1E2Q96JD6 320 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 SPACA5Q96QH8 159 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 DPM3Q9P2X0 92 aa11.74□□□□□ -0.53
NIF3L1-205ENST00000409588 A0A087X0M5 115 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 A0A1B0GX30 115 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 ODAMA1E959 279 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 A6NDX4 124 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 FAM90A22PA8MWA6 464 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 LEUTXA8MZ59 168 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 OOSP1A8MZH6 123 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 SLC33A1O00400 549 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 GPX5O75715 221 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 CD34P28906 385 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 PTGFRP43088 359 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 ETV1P50549 477 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 GTF2A1P52655 376 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 PPP3R1P63098 170 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 SCN1BQ07699 218 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 AESQ08117 197 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 RSU1Q15404 277 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 KRBOX4Q5JUW0 171 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 LINC00596Q86U02 117 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 OR10A7Q8NGE5 316 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 OR5D18Q8NGL1 313 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 NDNFQ8TB73 568 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 CFHR4Q92496 578 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 TMEM106AQ96A25 262 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 SMIM19Q96E16 107 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 S100A13Q99584 98 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 CKLFQ9UBR5 152 aa11.73□□□□□ -0.53
NIF3L1-205ENST00000409588 KBTBD11-OT1A0A1B0GTJ5 212 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 F2RL2O00254 374 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 TOR1AO14656 332 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CALCBP10092 127 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 CDK2P24941 298 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 GLIPR1P48060 266 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 TAS2R43P59537 309 aa11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 ADARB1P78563 741 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-205ENST00000409588 EMX1Q04741 257 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms