RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IRF4Q15306 451 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF79Q15937 498 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 SAXO2Q658L1 398 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ULK3Q6PHR2 472 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 IL34Q6ZMJ4 242 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ACP7Q6ZNF0 438 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 TEX43Q6ZNM6 134 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 C6orf120Q7Z4R8 191 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 BPIFB6Q8NFQ5 453 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 TTLQ8NG68 377 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR2L8Q8NGY9 312 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR4S2Q8NH73 311 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 NUBPLQ8TB37 319 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 RAB2BQ8WUD1 216 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR5P2Q8WZ92 322 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 MYDGFQ969H8 173 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 IL22RA2Q969J5 263 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 EEF1AKMT3Q96AZ1 226 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 TAMM41Q96BW9 452 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 SEH1LQ96EE3 360 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 NEURL3Q96EH8 262 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 PDXPQ96GD0 296 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 PITX2Q99697 317 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 GABRG3Q99928 467 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 APOL4Q9BPW4 351 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 TIMM29Q9BSF4 260 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC17A9Q9BYT1 436 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 LHX9Q9NQ69 397 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ACER3Q9NUN7 267 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 CLN6Q9NWW5 311 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 FBXL12Q9NXK8 326 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 SCN3BQ9NY72 215 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 RAB23Q9ULC3 237 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ANGPT4Q9Y264 503 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 TPRKBQ9Y3C4 175 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 FAM32AQ9Y421 112 aaKnown RBP3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ENPP4Q9Y6X5 453 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 CENPFP49454 3210 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ABCA7Q8IZY2 2146 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 ANKRD36A6QL64 1941 aa3.31□□□□□ -1.88
HMGB3P18-201ENST00000406327 PLXNA4Q9HCM2 1894 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 TRAV6A0A075B6T7 132 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 A0A0A6YYD5 115 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NKX2-6A6NCS4 301 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 A6NDN8 102 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 SERPINE3A8MV23 424 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 C5orf58C9J3I9 102 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NUPL2O15504 423 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 XRCC2O43543 280 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 UTS2O95399 124 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 OPN1SWP03999 348 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 S100A9P06702 114 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 HOXC4P09017 264 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 RAB3BP20337 219 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 CPN2P22792 545 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 GGT2P36268 569 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NUDT1P36639 197 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NUP62P37198 522 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 VSX2P58304 361 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 DSTNP60981 165 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 GNB2P62879 340 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC35A2P78381 396 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 HPCAP84074 193 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MXD1Q05195 221 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 PSG7Q13046 419 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 DAZ2Q13117 558 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MAD2L1BPQ15013 274 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MOGQ16653 247 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 TMEM255AQ5JRV8 349 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 TPTE2P1Q5T6R2 138 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 SYT6Q5T7P8 510 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MLIPQ5VWP3 458 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 AP1ARQ63HQ0 302 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 ENTHD1Q8IYW4 607 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR10G2Q8NGC3 310 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR52E5Q8NH55 327 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR5AK3PQ8NH89 298 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MITD1Q8WV92 249 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 RORBQ92753 470 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 KLK6Q92876 244 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NAT6Q93015 286 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 TMEM230Q96A57 120 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 EXOSC8Q96B26 276 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 YIPF6Q96EC8 236 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 NIPSNAP1Q9BPW8 284 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 DCUN1D5Q9BTE7 237 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 CCDC90BQ9GZT6 254 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 AICDAQ9GZX7 198 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 XKR8Q9H6D3 395 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 RETNQ9HD89 108 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 DAZ3Q9NR90 486 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 ABCB10Q9NRK6 738 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 ENPP5Q9UJA9 477 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 SCML1Q9UN30 329 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 TRAPPC4Q9Y296 219 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 POFUT2Q9Y2G5 429 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 ASB4Q9Y574 426 aa3.3□□□□□ -1.88
HMGB3P18-201ENST00000406327 MIA3Q5JRA6 1907 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms