RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SRP9P49458 86 aaKnown RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 NDUFA8P51970 172 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 CACNG7P62955 275 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 C2orf80Q0P641 193 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 MAD2L1BPQ15013 274 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 TAL2Q16559 108 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 ORMDL2Q53FV1 153 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2T5Q6IEZ7 315 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 AHSA2Q719I0 299 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM251Q8N6I4 163 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 Q8N976 141 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM161BQ8NDZ6 487 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR51D1Q8NGF3 324 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2T29Q8NH02 315 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 FLYWCH2Q96CP2 140 aaKnown RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 STACQ99469 402 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 VAT1Q99536 393 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 GABRG3Q99928 467 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 C1orf109Q9NX04 203 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC7A11Q9UPY5 501 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 NCOA1Q15788 1441 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 RB1CC1Q8TDY2 1594 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 FLT4P35916 1363 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 UHRF1BP1LA0JNW5 1464 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 MAGI1Q96QZ7 1491 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 TVP23AA6NH52 213 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 C21orf140B9A014 251 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 H0Y9J4 135 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SULT1C2O00338 296 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 FGF16O43320 207 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 CA11O75493 328 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2J2O76002 312 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 IFNA4P05014 189 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OCM2P0CE71 109 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 COX4I1P13073 169 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 UCHL3P15374 230 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 NQO1P15559 274 aaKnown RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF25P17030 456 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 HTR1DP28221 377 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 ERP29P30040 261 aaKnown RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SSTR5P35346 364 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 GABRA4P48169 554 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SERPINB10P48595 397 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 UBE2AP49459 152 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 IDH3GP51553 393 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNAJB13P59910 316 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARG2P78540 354 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPL19P84098 196 aaKnown RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 BAMBIQ13145 260 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 ERCC8Q13216 396 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR1Q1Q15612 314 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 C9orf64Q5T6V5 341 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAM45BPQ6NSW5 357 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 NIPAL1Q6NVV3 410 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAHD1Q6P587 224 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 PCP2Q8IVA1 136 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 IFT20Q8IY31 132 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 C4orf33Q8N1A6 199 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 LRRC52Q8N7C0 313 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 GPR26Q8NDV2 337 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2Y1Q8NGV0 311 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR5H6Q8NGV6 325 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR6K2Q8NGY2 324 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2AE1Q8NHA4 323 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 PIFOQ8TCI5 191 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR5P2Q8WZ92 322 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 HBEGFQ99075 208 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SDHCQ99643 169 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM208Q9BTX3 173 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMED9Q9BVK6 235 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 NUDT9Q9BW91 350 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 PDFQ9HBH1 243 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 NOX3Q9HBY0 568 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMBIM4Q9HC24 238 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 NEU3Q9UQ49 428 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SIGLEC9Q9Y336 463 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 SNX24Q9Y343 169 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 KIF15Q9NS87 1388 aa3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
HMGB1P13-201ENST00000406019 C2orf16Q68DN1 1984 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CAMSAP1Q5T5Y3 1602 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGHV2OR16-5A0A0B4J2B6 119 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGHV1-69DA0A0B4J2H0 117 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGHV5-51A0A0C4DH38 117 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 SEC14L6B5MCN3 397 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 H3BQF6 201 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 H7C2Y5 167 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 KPNA4O00629 521 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 SHOX2O60902 331 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TLX1NBP0CAT3 122 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 LIPCP11150 499 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 GTF2F2P13984 249 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CASP1P29466 404 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 HSPA9P38646 679 aaKnown RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 MAGEA12P43365 314 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR4D2P58180 307 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TAS2R41P59536 307 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TFAMQ00059 246 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms