RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 C20orf24Q9BUV8 137 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 RPS10P5Q9NQ39 176 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 FCGR2CP31995 323 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 MEOX1P50221 254 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 GPM6AP51674 278 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 EIF2S3LQ2VIR3 472 aaKnown RBP20.47■□□□□ 0.87
PABPN1-202ENST00000397276 NUFIP2Q7Z417 695 aaKnown RBP20.47■□□□□ 0.87
PABPN1-202ENST00000397276 LINC00469Q8N7U9 141 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 SMIM3Q9BZL3 60 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 PRDM14Q9GZV8 571 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 DEFB127Q9H1M4 99 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 LIPGQ9Y5X9 500 aa20.47■□□□□ 0.87
PABPN1-202ENST00000397276 TRBV23-1A0A0A0MS06 115 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 C5orf52A6NGY3 159 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 NUDT19A8MXV4 375 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 PTAFRP25105 342 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 RAB1AP62820 205 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 MALLQ13021 153 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 FAM76BQ5HYJ3 339 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 VASH2Q86V25 355 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 SLAMF9Q96A28 289 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 IP6K3Q96PC2 410 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 HS3ST6Q96QI5 342 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 CD5P06127 495 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 CTSDP07339 412 aaPredicted RBP20.46■□□□□ 0.87
PABPN1-202ENST00000397276 HAAOP46952 286 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 MRPL24Q96A35 216 aaKnown RBP20.46■□□□□ 0.87
PABPN1-202ENST00000397276 APH1AQ96BI3 265 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 FAM157AC9JC47 383 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 HSPB6O14558 160 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 SCGB1D2O95969 90 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 ZNF728P0DKX0 622 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 ABCA11PQ4W5N1 156 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 Q6ZPA2 131 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.46■□□□□ 0.87
PABPN1-202ENST00000397276 AQP10Q96PS8 301 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 SMCO4Q9NRQ5 59 aa20.46■□□□□ 0.87
PABPN1-202ENST00000397276 RBM11P57052 281 aaKnown RBP20.45■□□□□ 0.86
PABPN1-202ENST00000397276 SPEM2Q0P670 501 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 PRDX4Q13162 271 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 SPSB4Q96A44 273 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 KIRREL1Q96J84 757 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 CACFD1Q9UGQ2 172 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 STARD10Q9Y365 291 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 CFAP47Q6ZTR5 3102 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 CRYM-AS1A6NIL9 109 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 C3orf80F5H4A9 247 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 PDCD6O75340 191 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 S100A6P06703 90 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 SP1P08047 785 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 BCL3P20749 454 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 DTYMKP23919 212 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 BTNL8Q6UX41 500 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 MRPL21Q7Z2W9 205 aaKnown RBP20.45■□□□□ 0.86
PABPN1-202ENST00000397276 MCEMP1Q8IX19 187 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 LINC00470Q9BZP3 86 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 FGF23Q9GZV9 251 aaPredicted RBP20.45■□□□□ 0.86
PABPN1-202ENST00000397276 RNF122Q9H9V4 155 aa20.45■□□□□ 0.86
PABPN1-202ENST00000397276 A6NLC8 198 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 SNRNP70P08621 437 aaKnown RBP20.44■□□□□ 0.86
PABPN1-202ENST00000397276 FABP9Q0Z7S8 132 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 COLCA1Q6ZS62 124 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 RYDENQ9NUL5 291 aaKnown RBP20.44■□□□□ 0.86
PABPN1-202ENST00000397276 IL36RNQ9UBH0 155 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 PRSS50Q9UI38 385 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 C1orf196B1AJZ1 125 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 OR5AC1P0C628 307 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 GGNBP1Q5YKI7 109 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 Q6ZRG5 221 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 OR5L1Q8NGL2 311 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 OR11L1Q8NGX0 322 aa20.44■□□□□ 0.86
PABPN1-202ENST00000397276 SAT2Q96F10 170 aaPredicted RBP20.44■□□□□ 0.86
PABPN1-202ENST00000397276 REPIN1Q9BWE0 567 aaKnown RBP20.44■□□□□ 0.86
PABPN1-202ENST00000397276 LSM5Q9Y4Y9 91 aaKnown RBP20.44■□□□□ 0.86
PABPN1-202ENST00000397276 DUSP1P28562 367 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 IL15RAQ13261 267 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 RTN4IP1Q8WWV3 396 aaPredicted RBP20.43■□□□□ 0.86
PABPN1-202ENST00000397276 LYL1P12980 280 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 ECI1P42126 302 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 DAZAP2Q15038 168 aaPredicted RBP20.43■□□□□ 0.86
PABPN1-202ENST00000397276 KRBOX4Q5JUW0 171 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 LURAP1LQ8IV03 231 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 ZNF286AQ9HBT8 521 aa20.43■□□□□ 0.86
PABPN1-202ENST00000397276 SHANK1Q9Y566 2161 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 ARGFXA6NJG6 315 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 TXNL1O43396 289 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 HKR1P10072 659 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 FUT3P21217 361 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 HIKESHIQ53FT3 197 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 MEMO1Q9Y316 297 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 ZFHX4Q86UP3 3567 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 hCG_1809904A0A1W2PP81 198 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 A0A1W2PR64 198 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 A0A1W2PRV1 198 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 NOVA1P51513 510 aaKnown RBP20.42■□□□□ 0.86
PABPN1-202ENST00000397276 NRN1LQ496H8 165 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 NSUN5P2Q63ZY6 315 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 TMPRSS7Q7RTY8 843 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 HPSE2Q8WWQ2 592 aa20.42■□□□□ 0.86
PABPN1-202ENST00000397276 KCNIP3Q9Y2W7 256 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 463.2 ms