RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MMP27Q9H306 513 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 BABAM2Q9NXR7 383 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
CXCL12-205ENST00000395794 IGHV2-26A0A0B4J1V2 119 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 CLIC3O95833 236 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 CSN2P05814 226 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 HTR1DP28221 377 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 PTGFRP43088 359 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 RAB13P51153 203 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 ARHGDIBP52566 201 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 ZP1P60852 638 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 SLC34A1Q06495 639 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 CDK5R1Q15078 307 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 OR2G6Q5TZ20 316 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 RNF144BQ7Z419 303 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 RTN4RL2Q86UN3 420 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 OR4D6Q8NGJ1 314 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF596Q8TC21 504 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 CORO2AQ92828 525 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 TMEM106AQ96A25 262 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 S100A13Q99584 98 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 VCXQ9H320 206 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 ING3Q9NXR8 418 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 TCF19Q9Y242 345 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
CXCL12-205ENST00000395794 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ODAMA1E959 279 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 SLC33A1O00400 549 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-205ENST00000395794 TOR1AO14656 332 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 CDK2P24941 298 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 GLIPR1P48060 266 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ATXN7L3Q14CW9 347 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-205ENST00000395794 C2orf68Q2NKX9 166 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 PAN3Q58A45 887 aaKnown RBP11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ARSJQ5FYB0 599 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-205ENST00000395794 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ELP2Q6IA86 826 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 DYNAPQ8N1N2 210 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ABHD12Q8N2K0 398 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF565Q8N9K5 539 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 SMIM19Q96E16 107 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 BARHL1Q9BZE3 327 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 TMEM138Q9NPI0 162 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 PCDHB16Q9NRJ7 776 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 PAK1IP1Q9NWT1 392 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ING4Q9UNL4 249 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF281Q9Y2X9 895 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 HSPE1-MOB4S4R3N1 261 aa11.11□□□□□ -0.63
CXCL12-205ENST00000395794 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 EFCAB10A6NFE3 127 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 H0YJX3 145 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 GABRPO00591 440 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 HSPB6O14558 160 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 OGG1O15527 345 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 CHST1O43916 411 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 PEX14O75381 377 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
CXCL12-205ENST00000395794 ALDOBP05062 364 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-205ENST00000395794 CEACAM3P40198 252 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 DYNLT3P51808 116 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 PRRX1P54821 245 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 Q6P435 159 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 CRIP3Q6Q6R5 217 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 C8orf59Q8N0T1 100 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-205ENST00000395794 OR51A2Q8NGJ7 313 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 OR52N1Q8NH53 320 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 CAPSLQ8WWF8 208 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-205ENST00000395794 GHSRQ92847 366 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 METTL9Q9H1A3 318 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-205ENST00000395794 DPM3Q9P2X0 92 aa11.1□□□□□ -0.63
CXCL12-205ENST00000395794 MEIKINA0A087WXM9 373 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 A6NDX4 124 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF729A6NN14 1252 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-205ENST00000395794 LEUTXA8MZ59 168 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 MMP23AO75900 390 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 HTR3BO95264 441 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 CSF1P09603 554 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 VSIG10L2P0DP72 767 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-205ENST00000395794 BDKRB2P30411 391 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 BRS3P32247 399 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 CAPGP40121 348 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 EFNB2P52799 333 aa11.09□□□□□ -0.63
CXCL12-205ENST00000395794 TAS2R43P59537 309 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms