RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 Q6P435 159 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 CENPVQ7Z7K6 275 aaPredicted RBP13.46□□□□□ -0.25
SMN2-201ENST00000380741 WFDC9Q8NEX5 89 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 CAPSLQ8WWF8 208 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 HRASLS5Q96KN8 279 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 C4orf36Q96KX1 117 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 NEK6Q9HC98 313 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 ING3Q9NXR8 418 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 PCDHGB5Q9Y5G0 923 aa13.46□□□□□ -0.25
SMN2-201ENST00000380741 SH2D7A6NKC9 451 aaPredicted RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 J3QLW9 94 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 SLC33A1O00400 549 aaPredicted RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 ATP5HO75947 161 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 OR2F2O95006 317 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 LPLP06858 475 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 PF4V1P10720 104 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 ZNF19P17023 458 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 ARHGDIBP52566 201 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 SNRPGP62308 76 aaKnown RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 ATXN7L3Q14CW9 347 aaPredicted RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 HLA-DRB5Q30154 266 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 KRBOX4Q5JUW0 171 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 UTF1Q5T230 341 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 MEDAGQ5VYS4 303 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 ACBD7Q8N6N7 88 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 PYDC1Q8WXC3 89 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 RBM14Q96PK6 669 aaKnown RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 PPIL3Q9H2H8 161 aaKnown RBP13.45□□□□□ -0.26
SMN2-201ENST00000380741 RHOFQ9HBH0 211 aa13.45□□□□□ -0.26
SMN2-201ENST00000380741 A0A087X0M5 115 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 A0A1B0GX30 115 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 TCRBV4S1A1TA0A5B7 111 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 BUB1B-PAK6H3BSN5 160 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 TOR1AO14656 332 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 EI24O14681 340 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 AMY1AP04745 511 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 AMY2AP04746 511 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 CEACAM3P40198 252 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ALKBH1Q13686 389 aaKnown RBP13.44□□□□□ -0.26
SMN2-201ENST00000380741 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 C17orf58Q2M2W7 97 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ZIK1Q3SY52 487 aaPredicted RBP13.44□□□□□ -0.26
SMN2-201ENST00000380741 TPTE2P1Q5T6R2 138 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 C10orf99Q6UWK7 81 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 SAXO1Q8IYX7 474 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 CHST4Q8NCG5 386 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 OR4D6Q8NGJ1 314 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 CREB3L1Q96BA8 519 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ZCCHC4Q9H5U6 513 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
SMN2-201ENST00000380741 AASSQ9UDR5 926 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 EXOGQ9Y2C4 368 aaKnown RBP13.44□□□□□ -0.26
SMN2-201ENST00000380741 MYRFQ9Y2G1 1151 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ZNF281Q9Y2X9 895 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 ORC6Q9Y5N6 252 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
SMN2-201ENST00000380741 DNAH9Q9NYC9 4486 aa13.44□□□□□ -0.26
SMN2-201ENST00000380741 E9PQ18 207 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 DEGS1O15121 323 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 CIB2O75838 187 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 ALX3O95076 343 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 HCKP08631 526 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 TMEM225BP0DP42 221 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 OR3A4PP47883 348 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 ZP1P60852 638 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 RBM39Q14498 530 aaKnown RBP13.43□□□□□ -0.26
SMN2-201ENST00000380741 KISS1Q15726 138 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 MYDGFQ969H8 173 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 LGALS12Q96DT0 336 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 ALG8Q9BVK2 526 aa13.43□□□□□ -0.26
SMN2-201ENST00000380741 ZNF729A6NN14 1252 aaPredicted RBP13.42□□□□□ -0.26
SMN2-201ENST00000380741 HSPB6O14558 160 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 PF4P02776 101 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 NFYBP25208 207 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 PRRX1P54821 245 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 LHFPL3Q86UP9 236 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 OR4X2Q8NGF9 303 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 KIRREL1Q96J84 757 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 ISG20L2Q9H9L3 353 aaKnown RBP13.42□□□□□ -0.26
SMN2-201ENST00000380741 OR6C3Q9NZP0 311 aa13.42□□□□□ -0.26
SMN2-201ENST00000380741 COL7A1Q02388 2944 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 KBTBD11-OT1A0A1B0GTJ5 212 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 SNTNA6NMZ2 147 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 OOSP1A8MZH6 123 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 H0YJX3 145 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 SULT1B1O43704 296 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 ZFPL1O95159 310 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 MPIG6BO95866 241 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 MNDAP41218 407 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 GLP1RP43220 463 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 MTNR1BP49286 362 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 ALDH3A2P51648 485 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 SLC35A2P78381 396 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 GALEQ14376 348 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 C9orf152Q5JTZ5 239 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 LPCAT4Q643R3 524 aa13.41□□□□□ -0.26
SMN2-201ENST00000380741 CCDC144NLQ6NUI1 221 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms