RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 MFNGO00587 321 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 SCGNO76038 276 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 FCER2P06734 321 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 DNASE1P24855 282 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 MNDAP41218 407 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 TMEM33P57088 247 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 FAM216BQ8N7L0 139 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 S100ZQ8WXG8 99 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 RAB1CQ92928 201 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 TIMD4Q96H15 378 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 GAFA1Q96PS6 74 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 RCC2Q9P258 522 aaKnown RBP11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.52
HERPUD1-203ENST00000379792 ARID1AO14497 2285 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 MCRIP1C9JLW8 97 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF45Q02386 682 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 DCDC5Q6ZRR9 648 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 FGFRL1Q8N441 504 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 OR4S1Q8NGB4 309 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 NUDCD2Q8WVJ2 157 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 POM121Q96HA1 1249 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
HERPUD1-203ENST00000379792 TNFRSF13BO14836 293 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 TMPRSS2O15393 492 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ADAM20O43506 726 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 LMO1P25800 156 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 NR4A2P43354 598 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 GPR6P46095 362 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 PDLIM4P50479 330 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 DGCR2P98153 550 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF846Q147U1 533 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ATXN7L3Q14CW9 347 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 PYHIN1Q6K0P9 492 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 BAIAP2L2Q6UXY1 529 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ST8SIA4Q92187 359 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 SDHCQ99643 169 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 NUDT16L1Q9BRJ7 211 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF665Q9H7R5 613 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 BARX1Q9HBU1 254 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 SPACA1Q9HBV2 294 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
HERPUD1-203ENST00000379792 SSX5O60225 188 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF737O75373 536 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 PAX1P15863 534 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 PRSS3P35030 304 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 OR3A1P47881 315 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 PITPNAQ00169 270 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 ATPAF1Q5TC12 328 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 HACD4Q5VWC8 232 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 TMEM185AQ8NFB2 350 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 OR52I2Q8NH67 350 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 PLPPR1Q8TBJ4 325 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 NINJ1Q92982 152 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 SHARPINQ9H0F6 387 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 MYOZ1Q9NP98 299 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 ETAA1Q9NY74 926 aa11.75□□□□□ -0.53
HERPUD1-203ENST00000379792 MEX3AA1L020 520 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CD3GP09693 182 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 GNG2P59768 71 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 IL13RA1P78552 427 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 AESQ08117 197 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 GRK1Q15835 563 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 FAM168AQ92567 244 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 WDR12Q9GZL7 423 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 BPESC1Q9GZL8 116 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 K7N7A8 449 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 LANCL1O43813 399 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 FCN3O75636 299 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 TK1P04183 234 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 MELTFP08582 738 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 GIFP27352 417 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 PPP5CP53041 499 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 EDDM3AQ14507 147 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 KCNJ8Q15842 424 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 BAK1Q16611 211 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
HERPUD1-203ENST00000379792 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms