RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SFTPDP35247 375 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 KIR2DS4P43632 304 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 LGALS7P47929 136 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 FOXG1P55316 489 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 PKIAP61925 76 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 RRAS2P62070 204 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SELENOTP62341 195 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 RPS4XP62701 263 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 PNRC1Q12796 327 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 RSU1Q15404 277 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 HIST3H3Q16695 136 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 TYW3Q6IPR3 259 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 RWDD4Q6NW29 188 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC27A4Q6P1M0 643 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 GUSBP11Q6P575 273 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 LEG1Q6P5S2 330 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 WDR74Q6RFH5 385 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 RAD9BQ6WBX8 426 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 TMEM64Q6YI46 380 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 GALNT10Q86SR1 603 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 C4orf33Q8N1A6 199 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 OR5J2Q8NH18 312 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 OR5K2Q8NHB8 316 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 HMGCLL1Q8TB92 370 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 NPRL2Q8WTW4 380 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 TMEM19Q96HH6 336 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SMR3AQ99954 134 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 CMSS1Q9BQ75 279 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SDCBP2Q9H190 292 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SEMA6AQ9H2E6 1030 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 THAP10Q9P2Z0 257 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 OPTCQ9UBM4 332 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 LGALS13Q9UHV8 139 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC12A6Q9UHW9 1150 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 LSM7Q9UK45 103 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 ING4Q9UNL4 249 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 AK6Q9Y3D8 172 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SNX10Q9Y5X0 201 aa4.23□□□□□ -1.73
ECHDC1-204ENST00000368292 SCN1AP35498 2009 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OR5H14A6NHG9 310 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 INAFM1C9JVW0 142 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 FAAHO00519 579 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 MRASO14807 208 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 CRXO43186 299 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TCF21O43680 179 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 SYNGR1O43759 233 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 FOXH1O75593 365 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 LYPLA1O75608 230 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 CATP04040 527 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ARG1P05089 322 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 C8GP07360 202 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TACSTD2P09758 323 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OR56A5P0C7T3 313 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 PAX1P15863 534 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 HTR1DP28221 377 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 RPL3P39023 403 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TPI1P60174 286 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ARG2P78540 354 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 GPR50Q13585 617 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 KLF5Q13887 457 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 MEF2DQ14814 521 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 LRRC75BQ2VPJ9 315 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 HSD17B12Q53GQ0 312 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 FNBP1LQ5T0N5 605 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 HENMT1Q5T8I9 393 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 HIST2H3PS2Q5TEC6 136 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OTUD1Q5VV17 481 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 FRG2Q64ET8 278 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OR4A47Q6IF82 309 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TRIM40Q6P9F5 258 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TFAP2EQ6VUC0 442 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TMPPEQ6ZT21 453 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC16A13Q7RTY0 426 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 C16orf82Q7Z2V1 217 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TSEN54Q7Z6J9 526 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 MMD2Q8IY49 270 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 TPRX1Q8N7U7 411 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF383Q8NA42 475 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF439Q8NDP4 499 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OR6T1Q8NGN1 323 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 CNIH3Q8TBE1 160 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ART4Q93070 314 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 IL22RA2Q969J5 263 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 MRAP2Q96G30 205 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 NARS2Q96I59 477 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 P2RX4Q99571 388 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 KLF6Q99612 283 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 NKX3-1Q99801 234 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 GINS3Q9BRX5 216 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 NHEJ1Q9H9Q4 299 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 ENY2Q9NPA8 101 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC7A10Q9NS82 523 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 CALML5Q9NZT1 146 aa4.22□□□□□ -1.73
ECHDC1-204ENST00000368292 DHCR7Q9UBM7 475 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms