RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 PPP1R27Q86WC6 154 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 NR2C2APQ86WQ0 139 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 SKA3Q8IX90 412 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 ZBED8Q8IZ13 594 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 CADM2Q8N3J6 435 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 RNF175Q8N4F7 328 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 OR4A15Q8NGL6 344 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 ZFP90Q8TF47 636 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 NRBF2Q96F24 287 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 FOXN4Q96NZ1 517 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 OR5M11Q96RB7 305 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
CCL20-201ENST00000358813 TMEM246Q9BRR3 403 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 C1QTNF6Q9BXI9 259 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 SELENOIQ9C0D9 397 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 ISG20L2Q9H9L3 353 aaKnown RBP4.23□□□□□ -1.73
CCL20-201ENST00000358813 KCNIP1Q9NZI2 227 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 NOSIPQ9Y314 301 aaKnown RBP4.23□□□□□ -1.73
CCL20-201ENST00000358813 ZNF469Q96JG9 3925 aaPredicted RBP4.23□□□□□ -1.73
CCL20-201ENST00000358813 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
CCL20-201ENST00000358813 HRNRQ86YZ3 2850 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 OR5H1A6NKK0 313 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ZNF99A8MXY4 864 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 GPR171O14626 319 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 SIVA1O15304 175 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 GCM2O75603 506 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 LY6HO94772 140 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 KBTBD11O94819 623 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 FARS2O95363 451 aaKnown RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 UTS2O95399 124 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 TBX6O95947 436 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 CD8AP01732 235 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 CRYBA1P05813 215 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 CRABP2P29373 138 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 GABRA3P34903 492 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 MAGEA3P43357 314 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 GPR6P46095 362 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 NPBWR2P48146 333 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 UGT2B15P54855 530 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 HILS1P60008 231 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 LCN2P80188 198 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 CD300CQ08708 224 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 GUSBP1Q15486 140 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 OR4D1Q15615 310 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 UAP1Q16222 522 aaPredicted RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 GPR157Q5UAW9 335 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 FBXW9Q5XUX1 488 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 C3orf33Q6P1S2 294 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 Q6ZN92 141 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ABHD12Q8N2K0 398 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 COX18Q8N8Q8 333 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 OR6T1Q8NGN1 323 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 OR51F2Q8NH61 342 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ZNF675Q8TD23 568 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ITLN1Q8WWA0 313 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 POM121L2Q96KW2 1035 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ECSITQ9BQ95 431 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 RNF126Q9BV68 326 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 CDC42EP4Q9H3Q1 356 aaKnown RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 MED29Q9NX70 200 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 CCDC59Q9P031 241 aaKnown RBP4.22□□□□□ -1.73
CCL20-201ENST00000358813 DCDC2Q9UHG0 476 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 ACOT9Q9Y305 439 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 KPTNQ9Y664 436 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 V9GY05 133 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 NCKAP5O14513 1909 aa4.22□□□□□ -1.73
CCL20-201ENST00000358813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.738e-8■■■□□ 18.7
CCL20-201ENST00000358813 CR1P17927 2039 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IGHV3OR16-10A0A075B7F0 116 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IGHV3-15A0A0B4J1V0 119 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 A0A0G2JMP0 313 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 A0A0X1KG70 313 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 E7EQL1 145 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 ATP6V1G2-DDX39BF2Z307 99 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 MRPS12O15235 138 aaKnown RBP4.21□□□□□ -1.74
CCL20-201ENST00000358813 VENTXO95231 258 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 MSMBP08118 114 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IL3P08700 152 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IGLL1P15814 213 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 TCN1P20061 433 aaPredicted RBP4.21□□□□□ -1.74
CCL20-201ENST00000358813 KIR2DS4P43632 304 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 GPR4P46093 362 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 IDH3GP51553 393 aaPredicted RBP4.21□□□□□ -1.74
CCL20-201ENST00000358813 DR1Q01658 176 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 PAX2Q02962 417 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 CD47Q08722 323 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 FOXF1Q12946 379 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 TRAM2Q15035 370 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 USF2Q15853 346 aaPredicted RBP4.21□□□□□ -1.74
CCL20-201ENST00000358813 AANATQ16613 207 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 KCTD19Q17RG1 926 aaPredicted RBP4.21□□□□□ -1.74
CCL20-201ENST00000358813 SPIN4Q56A73 249 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 C6orf183Q5T699 404 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 OLFML2AQ68BL7 652 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 ANKRD26P1Q6NSI1 321 aa4.21□□□□□ -1.74
CCL20-201ENST00000358813 ERICH5Q6P6B1 374 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms