RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TRAF4Q9BUZ4 470 aaPredicted RBP15.58■□□□□ 0.08
USP39-201ENST00000323701 ALX4Q9H161 411 aaPredicted RBP15.58■□□□□ 0.08
USP39-201ENST00000323701 TLNRD1Q9H1K6 362 aa15.58■□□□□ 0.08
USP39-201ENST00000323701 PPA2Q9H2U2 334 aa15.58■□□□□ 0.08
USP39-201ENST00000323701 CACNA1DQ01668 2161 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 IGLV3-9A0A075B6K5 115 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 NKX2-6A6NCS4 301 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 NXPH2O95156 264 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 CASP6P55212 293 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 ZNF660Q6AZW8 331 aaPredicted RBP15.57■□□□□ 0.08
USP39-201ENST00000323701 POM121Q96HA1 1249 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 POLDIP2Q9Y2S7 368 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 HSPB11Q9Y547 144 aa15.57■□□□□ 0.08
USP39-201ENST00000323701 ANKHD1Q8IWZ3 2542 aaKnown RBP15.57■□□□□ 0.08
USP39-201ENST00000323701 A6NLC8 198 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 FAM90A27PA6NNH2 459 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 SNRPGP15A8MWD9 76 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 ERVH48-1M5A8F1 160 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 NAPSAO96009 420 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 ZMYND11Q15326 602 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 SLC22A25Q6T423 547 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 TMEM108Q6UXF1 575 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 C9orf62Q8N4C0 152 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 PLK3Q9H4B4 646 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 C5orf66Q9H5L9 145 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 HES4Q9HCC6 221 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.56■□□□□ 0.08
USP39-201ENST00000323701 DHRS2Q13268 280 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 UXS1Q8NBZ7 420 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 ANGPTL6Q8NI99 470 aa15.56■□□□□ 0.08
USP39-201ENST00000323701 DPCDQ9BVM2 203 aaPredicted RBP15.56■□□□□ 0.08
USP39-201ENST00000323701 DCHS2Q6V1P9 2916 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 MEIKINA0A087WXM9 373 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 SIRPB1O00241 398 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 SIX6O95475 246 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 OR2H2O95918 312 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 ZNF44P15621 663 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 PMELP40967 661 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 PPP1R1AQ13522 171 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 IL13RA2Q14627 380 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 SLC25A42Q86VD7 318 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 ZDHHC22Q8N966 263 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 POC1AQ8NBT0 407 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 NEK7Q8TDX7 302 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 GPN1Q9HCN4 374 aaPredicted RBP15.55■□□□□ 0.08
USP39-201ENST00000323701 TAAR3PQ9P1P4 343 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 EDARQ9UNE0 448 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 GPR132Q9UNW8 380 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 CEACAM18A8MTB9 384 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 SPRY3O43610 288 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 OR5H8P0DN80 308 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 AKR1C4P17516 323 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 PTAFRP25105 342 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 IGSF11Q5DX21 431 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 ADAM5Q6NVV9 412 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 TMEM230Q96A57 120 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 ELMOD3Q96FG2 381 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 ZNF2Q9BSG1 426 aaPredicted RBP15.55■□□□□ 0.08
USP39-201ENST00000323701 RTBDNQ9BSG5 229 aaPredicted RBP15.55■□□□□ 0.08
USP39-201ENST00000323701 CHMP1AQ9HD42 196 aaPredicted RBP15.55■□□□□ 0.08
USP39-201ENST00000323701 MGAT4CQ9UBM8 478 aa15.55■□□□□ 0.08
USP39-201ENST00000323701 MCRIP1C9JLW8 97 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 PRSS44E7EML9 344 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 SLC33A1O00400 549 aaPredicted RBP15.54■□□□□ 0.08
USP39-201ENST00000323701 DEGS1O15121 323 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 NOS1APO75052 506 aaPredicted RBP15.54■□□□□ 0.08
USP39-201ENST00000323701 HTR2BP41595 481 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 H2BFSP57053 126 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 ZNF146Q15072 292 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 NLRC3Q7RTR2 1065 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 LINC00596Q86U02 117 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 OR11H4Q8NGC9 324 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 ZNF431Q8TF32 576 aaPredicted RBP15.54■□□□□ 0.08
USP39-201ENST00000323701 HYLS1Q96M11 299 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 CHIAQ9BZP6 476 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 MYOZ1Q9NP98 299 aaPredicted RBP15.54■□□□□ 0.08
USP39-201ENST00000323701 C1orf123Q9NWV4 160 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 PIPOXQ9P0Z9 390 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 OR14J1Q9UGF5 321 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 ZFYVE26Q68DK2 2539 aa15.54■□□□□ 0.08
USP39-201ENST00000323701 HRNRQ86YZ3 2850 aaPredicted RBP15.54■□□□□ 0.08
USP39-201ENST00000323701 TRAV39A0A0B4J263 110 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 G3V3Q6 166 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 PTBP3O95758 552 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 GLRA1P23415 457 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 ZBTB25P24278 435 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 ASCL1P50553 236 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 P2RX3P56373 397 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 PEG10Q86TG7 708 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 Q8IYB0 196 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 NUP37Q8NFH4 326 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 PLPPR1Q8TBJ4 325 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 MRPL30Q8TCC3 161 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 OR2V2Q96R30 315 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 USB1Q9BQ65 265 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 ZNF436Q9C0F3 470 aaPredicted RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 IFT22Q9H7X7 185 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 Q9N2K0 584 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 DLL4Q9NR61 685 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms