RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 IER5LQ5T953 404 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SPSB3Q6PJ21 355 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF584Q8IVC4 421 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CA13Q8N1Q1 262 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 C17orf78Q8N4C9 275 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM156Q8N614 296 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CMTM2Q8TAZ6 248 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 BAHD1Q8TBE0 780 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SARAFQ96BY9 339 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 DNAJA3Q96EY1 480 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SFRP2Q96HF1 295 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 RASL10BQ96S79 203 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 LRFN3Q9BTN0 628 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SAP18O00422 153 aaKnown RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TLX3O43711 291 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 GDF9O60383 454 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 MPZL1O95297 269 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CLPSP04118 112 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CLEC3BP05452 202 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 OR10J4P0C629 311 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ESDP10768 282 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 AZU1P20160 251 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TSPOP30536 169 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 MPLP40238 635 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PAFAH1B2P68402 229 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PRTGQ2VWP7 1150 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 LRRC10Q5BKY1 277 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 KIAA0895LQ68EN5 471 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 DEFB128Q7Z7B8 93 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 C20orf196Q8IYI0 205 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 BATF2Q8N1L9 274 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SLC16A11Q8NCK7 471 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 OR52R1Q8NGF1 315 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 OR4P4Q8NGL7 312 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 OR10G4Q8NGN3 311 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 RNF128Q8TEB7 428 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CACNG8Q8WXS5 425 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 C4orf45Q96LM5 186 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TAAR6Q96RI8 345 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ABHD6Q9BV23 337 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 S1PR5Q9H228 398 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 WDR76Q9H967 626 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 C20orf141Q9NUB4 165 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PLEK2Q9NYT0 353 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 KLK13Q9UKR3 277 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 IGKV1D-42A0A075B6H8 117 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 FAM166BA8MTA8 275 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 MSTNO14793 375 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SEMA4FO95754 770 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 DDAH2O95865 285 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 MAS1P04201 325 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 LAMP2P13473 410 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 RPL23AP62750 156 aaKnown RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM128Q5BJH2 165 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 WBP2NLQ6ICG8 309 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF627Q7L945 461 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 C1orf174Q8IYL3 243 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 RCBTB1Q8NDN9 531 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 GUCD1Q96NT3 240 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 KCNK15Q9H427 330 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 MOB1AQ9H8S9 216 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 DECR2Q9NUI1 292 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 ABT1Q9ULW3 272 aaKnown RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 HS3ST3A1Q9Y663 406 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 A0A1B0GUS0 222 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 NPIPB7O75200 414 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 RBMXL2O75526 392 aaKnown RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SFT2D2O95562 160 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 WNT2P09544 360 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 STAG3L2P0CL84 134 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 ALOX5APP20292 161 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SUMO3P55854 103 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 BAXQ07812 192 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 RAB31Q13636 194 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 FAM53BQ14153 422 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SHBQ15464 509 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF74Q16587 644 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 VAX1Q5SQQ9 334 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 FAM90A2PQ658T7 463 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 AMMECR1LQ6DCA0 310 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 PTCRAQ6ISU1 281 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 CISD2Q8N5K1 135 aaKnown RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 NECAP1Q8NC96 275 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 OR51G1Q8NGK1 321 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SSC4DQ8WTU2 575 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 HSPB9Q9BQS6 159 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SDF2L1Q9HCN8 221 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 Q9N2K0 584 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 RCL1Q9Y2P8 373 aaKnown RBP5.79□□□□□ -1.48
ZNF540-201ENST00000316433 SCN3AQ9NY46 2000 aa5.79□□□□□ -1.48
ZNF540-201ENST00000316433 IGHV2-26A0A0B4J1V2 119 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 H7BYZ3 331 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 LILRA1O75019 489 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 DEDDO75618 318 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 SERPINA7P05543 415 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 CCL1P22362 96 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 UCP1P25874 307 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 516.5 ms