RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 H3BMH7 237 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 M0R135 149 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 APLNRP35414 380 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 OR1D5P58170 312 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 OR8G1Q15617 311 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-202ENST00000310645 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF799Q96GE5 643 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF286AQ9HBT8 521 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 CLDN34H7C241 214 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 PITX3O75364 302 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 G0S2P27469 103 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 TLE4Q04727 773 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
COL6A2-202ENST00000310645 MPPED1O15442 326 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 TMEM50AO95807 157 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 SLC35E3Q7Z769 313 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 POC1BQ8TC44 478 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 TLX3O43711 291 aaPredicted RBP12.72□□□□□ -0.37
COL6A2-202ENST00000310645 CHST1O43916 411 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 LRP4O75096 1905 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 D2HGDHQ8N465 521 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 LRTM2Q8N967 370 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 GJC3Q8NFK1 279 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 OR6X1Q8NH79 312 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 IGKV1-27A0A075B6S5 117 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 TRBV11-1A0A0K0K1C0 115 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 OR7C1O76099 320 aaPredicted RBP12.72□□□□□ -0.37
COL6A2-202ENST00000310645 MSR1P21757 451 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 FASLGP48023 281 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 RPS18P62269 152 aaKnown RBP12.72□□□□□ -0.37
COL6A2-202ENST00000310645 MRPS34P82930 218 aaKnown RBP12.72□□□□□ -0.37
COL6A2-202ENST00000310645 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 BORCS8Q96FH0 119 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
COL6A2-202ENST00000310645 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 TRDCB7Z8K6 153 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 RPL36A-HNRNPH2H7BZ11 118 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 PRAMEF20Q5VT98 475 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF664Q8N3J9 261 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 IL22RA1Q8N6P7 574 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 OR13D1Q8NGV5 346 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 OXGR1Q96P68 337 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 FER1L5A0AVI2 2057 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 DIDO1Q9BTC0 2240 aaKnown RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 C9J4A7 227 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 CA11O75493 328 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 PPYP01298 95 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 VEGFBP49765 207 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 PLPPR5Q32ZL2 321 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 TBC1D26Q86UD7 250 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
COL6A2-202ENST00000310645 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-202ENST00000310645 CD55P08174 381 aa12.71□□□□□ -0.38
COL6A2-202ENST00000310645 MOB3AQ96BX8 217 aa12.71□□□□□ -0.38
COL6A2-202ENST00000310645 RSG1Q9BU20 258 aa12.71□□□□□ -0.38
COL6A2-202ENST00000310645 TPSD1Q9BZJ3 242 aa12.71□□□□□ -0.38
COL6A2-202ENST00000310645 V9GYS6 101 aa12.71□□□□□ -0.38
COL6A2-202ENST00000310645 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 GZMBP10144 247 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 FGF7P21781 194 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 RBMXL1Q96E39 390 aaKnown RBP12.7□□□□□ -0.38
COL6A2-202ENST00000310645 THOC3Q96J01 351 aaKnown RBP12.7□□□□□ -0.38
COL6A2-202ENST00000310645 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 SLC7A10Q9NS82 523 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 HSPB6O14558 160 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 LCATP04180 440 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 DTYMKP23919 212 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 TMEM267Q0VDI3 215 aaPredicted RBP12.7□□□□□ -0.38
COL6A2-202ENST00000310645 CLN3Q13286 438 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 ADIRFQ15847 76 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 IZUMO4Q1ZYL8 232 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 MRGPRX4Q96LA9 322 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 PITPNC1Q9UKF7 332 aa12.7□□□□□ -0.38
COL6A2-202ENST00000310645 CDS2O95674 445 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 HBE1P02100 147 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 MMP7P09237 267 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-202ENST00000310645 FAM90A2PQ658T7 463 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 ZNF837Q96EG3 531 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-202ENST00000310645 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
COL6A2-202ENST00000310645 TMEM222Q9H0R3 208 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
COL6A2-202ENST00000310645 ABCA7Q8IZY2 2146 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms