RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZNF69Q9UC07 566 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 PLCE1Q9P212 2302 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 TRAV24A0A0B4J272 114 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 HSPB6O14558 160 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 GRNP28799 593 aaKnown RBP15.35■□□□□ 0.05
VIM-201ENST00000224237 SRSF7Q16629 238 aaKnown RBP eCLIP15.35■□□□□ 0.05
VIM-201ENST00000224237 C4orf46Q504U0 113 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 Q6P435 159 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 LHFPL1Q86WI0 220 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 DPCDQ9BVM2 203 aaPredicted RBP15.35■□□□□ 0.05
VIM-201ENST00000224237 RIMS4Q9H426 269 aaPredicted RBP15.35■□□□□ 0.05
VIM-201ENST00000224237 UFSP2Q9NUQ7 469 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 NECAP2Q9NVZ3 263 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 NDRG3Q9UGV2 375 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 HIVEP3Q5T1R4 2406 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 hCG_1807616A0A1W2PRN6 198 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 CEACAM18A8MTB9 384 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 SDCBPO00560 298 aaPredicted RBP15.34■□□□□ 0.05
VIM-201ENST00000224237 HS3ST1O14792 307 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 NAPSAO96009 420 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 OR4E1P0C645 316 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 UQCRFS1P47985 274 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 Q6ZS49 121 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 OR11H7Q8NGC8 314 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 CA5BP1Q8WTZ4 195 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 SCGB3A2Q96PL1 93 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 ATP23Q9Y6H3 246 aa15.34■□□□□ 0.05
VIM-201ENST00000224237 SH2D1BO14796 132 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 OR2H2O95918 312 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 GLRA1P23415 457 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 GMFBP60983 142 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 SORDQ00796 357 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 OR52B4Q8NGK2 314 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 RDH5Q92781 318 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 HYLS1Q96M11 299 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 CNTNAP3BQ96NU0 1288 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 OR2V2Q96R30 315 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 CNTNAP3Q9BZ76 1288 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 C1orf123Q9NWV4 160 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 GLS2Q9UI32 602 aa15.33■□□□□ 0.05
VIM-201ENST00000224237 ERRFI1Q9UJM3 462 aaPredicted RBP15.33■□□□□ 0.05
VIM-201ENST00000224237 ZFYVE26Q68DK2 2539 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 FPR2P25090 351 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 MDH2P40926 338 aaKnown RBP15.33■□□□□ 0.04
VIM-201ENST00000224237 ZNF81P51508 661 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 NCMAPQ5T1S8 102 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 AADACL3Q5VUY0 350 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 ADAM5Q6NVV9 412 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 ZFAND1Q8TCF1 268 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 MARCH1Q8TCQ1 289 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 MEGF10Q96KG7 1140 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 SLA2Q9H6Q3 261 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 TREM2Q9NZC2 230 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 ZDHHC8Q9ULC8 765 aa15.33■□□□□ 0.04
VIM-201ENST00000224237 SPRY3O43610 288 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 ECI1P42126 302 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 SMIM21Q3B7S5 101 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 PAN3Q58A45 887 aaKnown RBP15.32■□□□□ 0.04
VIM-201ENST00000224237 SHEQ5VZ18 495 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 FAHD2BQ6P2I3 314 aaPredicted RBP15.32■□□□□ 0.04
VIM-201ENST00000224237 ACP7Q6ZNF0 438 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 Q6ZPA2 131 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 SLC25A42Q86VD7 318 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 ASCC1Q8N9N2 400 aaKnown RBP15.32■□□□□ 0.04
VIM-201ENST00000224237 OR10Z1Q8NGY1 313 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 PRR7Q8TB68 274 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 FAHD2AQ96GK7 314 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 TMEM246Q9BRR3 403 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 WDR13Q9H1Z4 485 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 FN3KRPQ9HA64 309 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 Q9N2K0 584 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 KCNJ16Q9NPI9 418 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 ZNF222Q9UK12 451 aa15.32■□□□□ 0.04
VIM-201ENST00000224237 TRBV6-6A0A0A6YYG2 114 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 HAND1O96004 215 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 OR4A8P0C604 315 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 OR5H8P0DN80 308 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 ANXA3P12429 323 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 CXCL3P19876 107 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 NPY4RP50391 375 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 SURF2Q15527 256 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 ADIPOQQ15848 244 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 C17orf107Q6ZR85 190 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 PEG10Q86TG7 708 aaKnown RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 ZNF431Q8TF32 576 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 RANBP3Q9H6Z4 567 aaPredicted RBP15.31■□□□□ 0.04
VIM-201ENST00000224237 IL19Q9UHD0 177 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 GPR132Q9UNW8 380 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 ICE1Q9Y2F5 2266 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 POM121CA8CG34 1229 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 SIRPB1O00241 398 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 WNT9BO14905 357 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 KNG1P01042 644 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 TNFSF4P23510 183 aa15.31■□□□□ 0.04
VIM-201ENST00000224237 CFHR2P36980 270 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms