RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Cnih4Q9CX13 139 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mrpl13Q9D1P0 178 aaKnown RBP12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Prss8Q9ESD1 342 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Stard10Q9JMD3 291 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 TinagQ9WUR0 475 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Esp16A8R0U9 85 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mettl11bB2RXM4 283 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ankrd29D3YVV3 309 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Prr23a1G3UW32 258 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mup3P04939 184 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Il6P08505 211 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rab22aP35285 194 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Bmp8bP55105 399 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Tamm41Q3TUH1 337 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nxt2Q3UNA4 142 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Pdp1Q3UV70 538 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Sema6dQ76KF0 1073 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ap3s2Q8BSZ2 193 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ing4Q8C0D7 249 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nadk2Q8C5H8 452 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Plcz1Q8K4D7 647 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 AfmidQ8K4H1 305 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr980Q8VH08 310 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Znf672Q99LH4 468 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Sgo1Q9CXH7 517 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Plekha3Q9ERS4 297 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Clec4eQ9R0Q8 214 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nprl2Q9WUE4 380 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Tet1Q3URK3 2007 aaKnown RBP12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 GusbP12265 648 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mesp1P97309 243 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm6760Q0ZNK3 87 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 HgsnatQ3UDW8 656 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 GcsamQ6RFH4 181 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Lsm11Q8BUV6 361 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gtf2f2Q8R0A0 249 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ubac2Q8R1K1 345 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Swsap1Q8VCI7 278 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1392Q8VFA6 311 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Odf4Q8VI88 290 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ripply3Q924S9 152 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Lamtor1Q9CQ22 161 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Trappc2Q9CQP2 140 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Dram2Q9CR48 267 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Tmem9bQ9JJR8 199 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gpr37Q9QY42 600 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Polg2Q9QZM2 459 aa12.85□□□□□ -0.35
Nup88-202ENSMUST00000108530 Frem1Q684R7 2191 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr250E9PV37 331 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr225E9PWF9 419 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Vmn1r14H3BJ46 303 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Hspb1P14602 209 aaKnown RBP12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nat2P50295 290 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rab1AP62821 205 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gng8P63078 70 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Pip5k1aP70182 546 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 McptlQ00356 246 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mbd6Q3TY92 1003 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Eif4e1bQ3UTA9 244 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Trav5d-4Q5R1F6 114 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Adh7Q64437 374 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Map6Q7TSJ2 906 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Fam210aQ8BGY7 273 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Lix1lQ8BQ89 337 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Vmn1r74Q8R290 304 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Tmem144Q8VEH0 348 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1424Q8VFV1 313 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr73Q920P2 313 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Exosc4Q921I9 245 aaKnown RBP12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mpc2Q9D023 127 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mrps30Q9D0G0 442 aaKnown RBP12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ccr9Q9WUT7 369 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Pusl1A2ADA5 291 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm7970L7N271 213 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm7980L7N471 213 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rbbp9O88851 186 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ca6P18761 317 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Sstr2P30875 369 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ndufb6Q3UIU2 128 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr782Q7TRI2 314 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Neil1Q8K4Q6 389 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Fcrl1Q8R4Y0 343 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1324Q8VEU7 332 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Slc33a1Q99J27 550 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 PecrQ99MZ7 303 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Wnt16Q9QYS1 364 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Syt9Q9R0N9 491 aa12.84□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm43720E0CXM8 267 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vmn1r174E9PYW5 313 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 H2-T10F6T1I5 379 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ifi203O35368 408 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 BlkP16277 499 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Btg1P62325 171 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 St8sia5P70126 412 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1442Q0VEV7 312 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ankrd33bQ3U0L2 486 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm826Q3UQ74 109 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem30bQ8BHG3 353 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Lgi3Q8K406 548 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gpn1Q8VCE2 372 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms