RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ZNF91Q05481 1191 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 RBM39Q14498 530 aaKnown RBP15.88■□□□□ 0.13
TARDBP-228ENST00000629725 KPNB1Q14974 876 aaKnown RBP15.88■□□□□ 0.13
TARDBP-228ENST00000629725 UBE2V2Q15819 145 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 Q6ZSR3 168 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 Q8IYB0 196 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 PLEKHA1Q9HB21 404 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 LINC00527Q9UJ94 153 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 R4GMQ9 66 aa15.88■□□□□ 0.13
TARDBP-228ENST00000629725 B2RBV5 119 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 OR3A1P47881 315 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 FUT6P51993 359 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 ACTR3P61158 418 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 GK3PQ14409 553 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 ZNF146Q15072 292 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 FAM98BQ52LJ0 330 aaKnown RBP15.87■□□□□ 0.13
TARDBP-228ENST00000629725 DHFR2Q86XF0 187 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 THNSL2Q86YJ6 484 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 OR5M8Q8NGP6 311 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 GAR1Q9NY12 217 aaKnown RBP15.87■□□□□ 0.13
TARDBP-228ENST00000629725 TAS2R3Q9NYW6 316 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 SNX5Q9Y5X3 404 aa15.87■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A18PA6NE21 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A16PA6NEW6 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A20PA6NIJ5 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A9PA6NNJ1 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A12PA8MX19 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A5PA8MXJ8 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A15PP0C7V4 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A13PP0C7W8 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A14PP0C7W9 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FAM90A24PP0C7X0 464 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 OSMP13725 252 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 GDNFP39905 211 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 CXCR4P61073 352 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 ZNF322Q6U7Q0 402 aaPredicted RBP15.86■□□□□ 0.13
TARDBP-228ENST00000629725 PLEKHG7Q6ZR37 379 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 C5orf56Q8N8D9 126 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 CORO2AQ92828 525 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 APOL4Q9BPW4 351 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 TEX12Q9BXU0 123 aa15.86■□□□□ 0.13
TARDBP-228ENST00000629725 RBFOX1Q9NWB1 397 aaKnown RBP15.86■□□□□ 0.13
TARDBP-228ENST00000629725 FUOMA2VDF0 154 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 CCDC182A6NF36 153 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 MAGEB4O15481 346 aaPredicted RBP15.85■□□□□ 0.13
TARDBP-228ENST00000629725 CCL1P22362 96 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 NPBWR2P48146 333 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 CDC42P60953 191 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 MS4A2Q01362 244 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 FOXRED2Q8IWF2 684 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 FAM58AQ8N1B3 248 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 ARHGAP24Q8N264 748 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 OR4D6Q8NGJ1 314 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 OR8U1Q8NH10 309 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 RPEQ96AT9 228 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 BORCS8Q96FH0 119 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 DCLRE1BQ9H816 532 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 PCDHB16Q9NRJ7 776 aa15.85■□□□□ 0.13
TARDBP-228ENST00000629725 A0A087X0M5 115 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 TRBV2A0A0J9YWF9 115 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 LCE6AA0A183 80 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 A0A1B0GX30 115 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SIRPB1O00241 398 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 FGF16O43320 207 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 ENTPD6O75354 484 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 GATBO75879 557 aaKnown RBP15.84■□□□□ 0.13
TARDBP-228ENST00000629725 CALCBP10092 127 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 LYL1P12980 280 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 BCL3P20749 454 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SNU13P55769 128 aaKnown RBP15.84■□□□□ 0.13
TARDBP-228ENST00000629725 TRIM25Q14258 630 aaKnown RBP15.84■□□□□ 0.13
TARDBP-228ENST00000629725 HES1Q14469 280 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 ODF4Q2M2E3 257 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 DEFB136Q30KP8 78 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SPIN3Q5JUX0 258 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 TMEM236Q5W0B7 351 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 TEX38Q6PEX7 206 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SLC35E3Q7Z769 313 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 STPG2Q8N412 459 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 OR56B4Q8NH76 319 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 TOMM40LQ969M1 308 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 NSL1Q96IY1 281 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 RCHY1Q96PM5 261 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 CNN2Q99439 309 aaKnown RBP15.84■□□□□ 0.13
TARDBP-228ENST00000629725 ZNF556Q9HAH1 456 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 PALMDQ9NP74 551 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SCOCQ9UIL1 159 aa15.84■□□□□ 0.13
TARDBP-228ENST00000629725 ZNF256Q9Y2P7 627 aaPredicted RBP15.84■□□□□ 0.13
TARDBP-228ENST00000629725 SEC14L6B5MCN3 397 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 H3BSH0 61 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 CYB5AP00167 134 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 CST1P01037 141 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 IGHG2P01859 326 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 TMEM11P17152 192 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 PRKACAP17612 351 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 PTGFRP43088 359 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 GLIPR1P48060 266 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 AESQ08117 197 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 CHST5Q9GZS9 411 aa15.83■□□□□ 0.12
TARDBP-228ENST00000629725 TVP23BQ9NYZ1 205 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms