RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CAMLGP49069 296 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 HIST3H3Q16695 136 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 TMEM176BQ3YBM2 270 aaPredicted RBP7.59□□□□□ -1.19
VCL-207ENST00000624354 RHBDD2Q6NTF9 364 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 CRIP3Q6Q6R5 217 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 SUMF2Q8NBJ7 301 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 SLC38A9Q8NBW4 561 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 RNF138Q8WVD3 245 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 PIGTQ969N2 578 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 JSRP1Q96MG2 331 aaPredicted RBP7.59□□□□□ -1.19
VCL-207ENST00000624354 DDA1Q9BW61 102 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 ANXA10Q9UJ72 324 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 A0A087WZY1 265 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 A0A0U1RQV5 110 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 IGLV3-1P01715 115 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 TMEM225BP0DP42 221 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 MSR1P21757 451 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 CLDN17P56750 224 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 PIGPP57054 158 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 RPUSD3Q6P087 351 aaKnown RBP7.59□□□□□ -1.19
VCL-207ENST00000624354 OR10G3Q8NGC4 313 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 ERGIC1Q969X5 290 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 SCRT1Q9BWW7 348 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 NELFAQ9H3P2 528 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 SEMA5BQ9P283 1151 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 PIGLQ9Y2B2 252 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 URGCP-MRPS24S4R325 110 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 V9GYS6 101 aa7.59□□□□□ -1.19
VCL-207ENST00000624354 IGLV3-32A0A0A0MS00 114 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 PIAS2O75928 621 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 TRGC2P03986 189 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 CXCL1P09341 107 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 DANCRP0C864 163 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 GLB1P16278 677 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 TAGLN2P37802 199 aaKnown RBP7.58□□□□□ -1.2
VCL-207ENST00000624354 NKAIN1Q4KMZ8 207 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ABCA11PQ4W5N1 156 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ZNF343Q6P1L6 599 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 Q8WTZ3 238 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 TOMM40LQ969M1 308 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 GNRHR2Q96P88 292 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 HDHD3Q9BSH5 251 aaPredicted RBP7.58□□□□□ -1.2
VCL-207ENST00000624354 DECR2Q9NUI1 292 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 CEP250Q9BV73 2442 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 TECTAO75443 2155 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 IGLV3-12A0A075B6K2 115 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ZNF850A8MQ14 1090 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 CYB5BO43169 146 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ZFAND5O76080 213 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 PRH1P02810 166 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 PTGDSP41222 190 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 CSNK1A1P48729 337 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 NXPH1P58417 271 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ELOBQ15370 118 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ALKBH2Q6NS38 261 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 NAXEQ8NCW5 288 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 OR2M3Q8NG83 312 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 FSCN3Q9NQT6 498 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 C19orf12Q9NSK7 152 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 MYOTQ9UBF9 498 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 LOC102725191A0A1B0GVB3 256 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 C9J4A7 227 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 OR2J2O76002 312 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 MBPP02686 304 aaPredicted RBP7.58□□□□□ -1.2
VCL-207ENST00000624354 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ZNF728P0DKX0 622 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 MYF5P13349 255 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 FKBP2P26885 142 aaKnown RBP7.58□□□□□ -1.2
VCL-207ENST00000624354 UCP2P55851 309 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 SLC35A1P78382 337 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 SP6Q3SY56 376 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 SLC22A25Q6T423 547 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 OR13D1Q8NGV5 346 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 C10orf35Q96D05 121 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 Q96M66 194 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 ARV1Q9H2C2 271 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 NECAP2Q9NVZ3 263 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 GOLT1BQ9Y3E0 138 aa7.58□□□□□ -1.2
VCL-207ENST00000624354 A0A1B0GV50 99 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 GPR137BO60478 399 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 DIRAS3O95661 229 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 EDN3P14138 238 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 P2RY1P47900 373 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 MTCP1P56278 107 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 UBE2KP61086 200 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 SLC10A1Q14973 349 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 JOSD1Q15040 202 aaPredicted RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 GPR157Q5UAW9 335 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 PLXDC2Q6UX71 529 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 RABEPKQ7Z6M1 372 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 RTN4IP1Q8WWV3 396 aaPredicted RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 NAA60Q9H7X0 242 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 OR14J1Q9UGF5 321 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 HS3ST3B1Q9Y662 390 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 PHF3Q92576 2039 aaKnown RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 TGIF2-C20orf24A0A0A6YYL0 155 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 M0R135 149 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms