RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	TRAPPC1	Q9Y5R8	145 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	WDR90	Q96KV7	1748 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	CHST1	O43916	411 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	GZMB	P10144	247 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	AADAC	P22760	399 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	BSX	Q3C1V8	233 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	LIAT1	Q6ZQX7	453 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	GRINA	Q7Z429	371 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	PIGC	Q92535	297 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	VAMP8	Q9BV40	100 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	PRSS50	Q9UI38	385 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179		A8MWP6	167 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	DVL1	O14640	695 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	METTL15P1	P0C7V9	234 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	IGFBP3	P17936	291 aa	Predicted RBP	13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	PMEL	P40967	661 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	ECI1	P42126	302 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	FOXK1	P85037	733 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	FAM78B	Q5VT40	261 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	VN1R17P	Q8TDU5	208 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	DDIT4L	Q96D03	193 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	CALHM2	Q9HA72	323 aa		13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179	RYDEN	Q9NUL5	291 aa	Known RBP	13.73	□□□□□ -0.21
SYNRG-223	ENST00000616179		A0A0A6YYD4	124 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	C20orf202	A1L168	122 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	BGLAP	P02818	100 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	S100A7	P31151	101 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	PSMB3	P49720	205 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	RTP5	Q14D33	572 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	CAPNS2	Q96L46	248 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	RNF24	Q9Y225	148 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	PRAMEF26	H0Y7S4	382 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	ZNF100	Q8IYN0	542 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	MESP1	Q9BRJ9	268 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	IGKV1D-8	A0A087WSZ0	117 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	WIPF3	A6NGB9	483 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	TMEM14DP	A8MWL7	114 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	UBE2G2	P60604	165 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	DLX2	Q07687	328 aa	Predicted RBP	13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	FAM69B	Q5VUD6	431 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	MCEMP1	Q8IX19	187 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	TMEM252	Q8N6L7	170 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	LRRC75A	Q8NAA5	344 aa		13.72	□□□□□ -0.21
SYNRG-223	ENST00000616179	IGKV1D-43	A0A0B4J1Z2	117 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	CXorf51A	A0A1B0GTR3	108 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	CYB5R3	P00387	301 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SPINK2	P20155	84 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SPEM2	Q0P670	501 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SLC35E3	Q7Z769	313 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	MRPL43	Q8N983	215 aa	Known RBP	13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	MVB12A	Q96EY5	273 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	GINS3	Q9BRX5	216 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SNHG12	Q9BXW3	62 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	NPS	P0C0P6	89 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	EFNA3	P52797	238 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	NAT6	Q93015	286 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SLC46A1	Q96NT5	459 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	SDK2	Q58EX2	2172 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	PLXNA3	P51805	1871 aa		13.71	□□□□□ -0.21
SYNRG-223	ENST00000616179	IL33	O95760	270 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	MFAP5	Q13361	173 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	FDX2	Q6P4F2	183 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR2T10	Q8NGZ9	312 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	EXTL1	Q92935	676 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	CTHRC1	Q96CG8	243 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	ZDHHC11	Q9H8X9	412 aa		13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.71	□□□□□ -0.22
SYNRG-223	ENST00000616179	GCG	P01275	180 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	CLDN17	P56750	224 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	FBXL14	Q8N1E6	418 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR2AE1	Q8NHA4	323 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	MAP1LC3B2	A6NCE7	125 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	SPINK4	O60575	86 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	ZNF737	O75373	536 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	HSPB1	P04792	205 aa	Known RBP	13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	DMWD	Q09019	674 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	RLN3	Q8WXF3	142 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	SHD	Q96IW2	340 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	CCNL2	Q96S94	520 aa	Predicted RBP	13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	MAP1LC3B	Q9GZQ8	125 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	SLC25A22	Q9H936	323 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	C3orf85	A0A1B0GTC6	90 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	PNLIP	P16233	465 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	GPR3	P46089	330 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	FOXL2	P58012	376 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	HIST1H3A	P68431	136 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	ENDOG	Q14249	297 aa	Known RBP	13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	NAGK	Q9UJ70	344 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	FANCM	Q8IYD8	2048 aa		13.7	□□□□□ -0.22
SYNRG-223	ENST00000616179	CLDN1	O95832	211 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	FGF5	P12034	268 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	ICAM4	Q14773	271 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	LILRA6	Q6PI73	481 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	RNF133	Q8WVZ7	376 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	ATP5S	Q99766	215 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	TMEM208	Q9BTX3	173 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	DIDO1	Q9BTC0	2240 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms