RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 LHX4Q969G2 390 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 PKIBQ9C010 78 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 TXNL4BQ9NX01 149 aaKnown RBP10.97□□□□□ -0.65
CTSA-213ENST00000606782 C1RLQ9NZP8 487 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 CKLFQ9UBR5 152 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 SSR3Q9UNL2 185 aa10.97□□□□□ -0.65
CTSA-213ENST00000606782 TRAV1-2A0A0B4J238 106 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 NOS1APO75052 506 aaPredicted RBP10.96□□□□□ -0.65
CTSA-213ENST00000606782 MPZP25189 248 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 IER3P46695 156 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 HAAOP46952 286 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 CAV3P56539 151 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 PPP3R1P63098 170 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 RELBQ01201 579 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 FIP1L1Q6UN15 594 aaKnown RBP10.96□□□□□ -0.65
CTSA-213ENST00000606782 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 ANGPTL5Q86XS5 388 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 DYRK2Q92630 601 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 MED30Q96HR3 178 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 FUNDC2Q9BWH2 189 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 BEX1Q9HBH7 125 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 TCF7L1Q9HCS4 588 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 SNTG1Q9NSN8 517 aa10.96□□□□□ -0.65
CTSA-213ENST00000606782 A0A0U1RQK1 487 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 MAGEB3O15480 346 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 AKR7A2O43488 359 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 RHBDL1O75783 438 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 MAS1P04201 325 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 CRYBA1P05813 215 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 HCKP08631 526 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 OCMP0CE72 109 aaPredicted RBP10.95□□□□□ -0.66
CTSA-213ENST00000606782 OMGP23515 440 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 CALRP27797 417 aaKnown RBP10.95□□□□□ -0.66
CTSA-213ENST00000606782 RAG2P55895 527 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 ZP1P60852 638 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 IL24Q13007 206 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 PDZK1IP1Q13113 114 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 TIMM50Q3ZCQ8 353 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 C22orf42Q6IC83 251 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 HAGHLQ6PII5 290 aaPredicted RBP10.95□□□□□ -0.66
CTSA-213ENST00000606782 ASCL4Q6XD76 172 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 MKXQ8IYA7 352 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 CMTM4Q8IZR5 234 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 Q8N7P7 452 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 OR5T2Q8NGG2 359 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 TNFRSF14Q92956 283 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 GAFA1Q96PS6 74 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 SPACA5Q96QH8 159 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 CHCHD6Q9BRQ6 235 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 DNAJB11Q9UBS4 358 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 ZNF222Q9UK12 451 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 GSTK1Q9Y2Q3 226 aa10.95□□□□□ -0.66
CTSA-213ENST00000606782 SHISA3A0PJX4 238 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 J3QT63 122 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 M0R1W7 72 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 SYNGR1O43759 233 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 SELLP14151 372 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 ZNF93P35789 620 aaPredicted RBP10.94□□□□□ -0.66
CTSA-213ENST00000606782 ERVK11-1P61568 191 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 GUCA2AQ02747 115 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 IKZF1Q13422 519 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 DGUOKQ16854 277 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 DDI2Q5TDH0 399 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 OLFML2AQ68BL7 652 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 GPR141Q7Z602 305 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 ANKRD13BQ86YJ7 626 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 ZSCAN4Q8NAM6 433 aaPredicted RBP10.94□□□□□ -0.66
CTSA-213ENST00000606782 FOXRED1Q96CU9 486 aaPredicted RBP10.94□□□□□ -0.66
CTSA-213ENST00000606782 GFI1Q99684 422 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 EXOSC4Q9NPD3 245 aaKnown RBP10.94□□□□□ -0.66
CTSA-213ENST00000606782 RASL12Q9NYN1 266 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
CTSA-213ENST00000606782 SLC25A10Q9UBX3 287 aaPredicted RBP10.94□□□□□ -0.66
CTSA-213ENST00000606782 NOTCH1P46531 2555 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 NKX6-3A6NJ46 265 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 WIPF1O43516 503 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 AIREO43918 545 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 KNG1P01042 644 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 PGA5P0DJD9 388 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 PSG2P11465 335 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 GLRA1P23415 457 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 PTGFRP43088 359 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 PSMD7P51665 324 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 C1orf100Q5SVJ3 147 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 GLT8D1Q68CQ7 371 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 TREML4Q6UXN2 200 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms