RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 PPP1R35Q8TAP8 253 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 RGP1Q92546 391 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 TMEM80Q96HE8 168 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 CITED1Q99966 193 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 MEGF9Q9H1U4 602 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 TCF7L1Q9HCS4 588 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 EXOSC4Q9NPD3 245 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 DIMT1Q9UNQ2 313 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 DHDHQ9UQ10 334 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 PCDHGB5Q9Y5G0 923 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 IGKV1-12A0A0C4DH73 117 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 IRGMA1A4Y4 181 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 M0QZ24 198 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 SH2D1BO14796 132 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 PSPNO60542 156 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 CLPXO76031 633 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 LALBAP00709 142 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 IGKV1D-12P01611 117 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 IGHV1-8P0DP01 117 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 TMEM225BP0DP42 221 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 MYL12AP19105 171 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 PROK1P58294 105 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 MEF2CQ06413 473 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 ST3GAL4Q11206 333 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 MRPL28Q13084 256 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF146Q15072 292 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 FAM189A2Q15884 450 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 SERPINA12Q8IW75 414 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 ZFP41Q8N8Y5 198 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 BPIFB6Q8NFQ5 453 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 OR5D14Q8NGL3 314 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 TFAP2CQ92754 450 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 AJUBAQ96IF1 538 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 VCXQ9H320 206 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 C16orf95Q9H693 158 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 HMG20AQ9NP66 347 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 ABCB10Q9NRK6 738 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 BABAM2Q9NXR7 383 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 ING3Q9NXR8 418 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 EXOSC1Q9Y3B2 195 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 HSPE1-MOB4S4R3N1 261 aa10.31□□□□□ -0.76
NPLOC4-213ENST00000573519 EFCAB10A6NFE3 127 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 MGST3O14880 152 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 TIMM23O14925 209 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 MAGEB3O15480 346 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 SULT1B1O43704 296 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 TSPAN9O75954 239 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 KDM4BO94953 1096 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 OR2H2O95918 312 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 RBP4P02753 201 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 MT-ND2P03891 347 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 RPSAP08865 295 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF44P15621 663 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 GABRA5P31644 462 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 OR3A1P47881 315 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 AQP4P55087 323 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 CDK5R1Q15078 307 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 RPL22L1Q6P5R6 122 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 TCF23Q7RTU1 214 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 FBLIM1Q8WUP2 373 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 GPER1Q99527 375 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 NKX3-1Q99801 234 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 RAB18Q9NP72 206 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 CHCHD3Q9NX63 227 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 PSORS1C1Q9UIG5 152 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 TBL2Q9Y4P3 447 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
NPLOC4-213ENST00000573519 C21orf33P30042 268 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 RAB13P51153 203 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 P2RX3P56373 397 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 KISS1Q15726 138 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 SSX2Q16385 188 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 AANATQ16613 207 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF626Q68DY1 528 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 CRIP3Q6Q6R5 217 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 AHSA2Q719I0 299 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 SATL1Q86VE3 508 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 DYNAPQ8N1N2 210 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 OR51A2Q8NGJ7 313 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 OR13C5Q8NGS8 318 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 HAVCR2Q8TDQ0 301 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 FOXRED1Q96CU9 486 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 ORAI1Q96D31 301 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 FAM192AQ9GZU8 254 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 SEBOXQ9HB31 216 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 SIGLEC9Q9Y336 463 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 HILPDAQ9Y5L2 63 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 SESN1Q9Y6P5 492 aa10.29□□□□□ -0.76
NPLOC4-213ENST00000573519 TRGV10A0A0A0MS01 117 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 PNMA8CA0A1B0GUJ8 204 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 FUOMA2VDF0 154 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 FAM90A8PA6NJQ4 464 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 ODF3BA8MYP8 253 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 DEGS1O15121 323 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 OGG1O15527 345 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms