RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SRFP11831 508 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 FKBP2P26885 142 aaKnown RBP15.11■□□□□ 0.01
SCARF1-205ENST00000571272 ATP6V0CP27449 155 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 RPS10P46783 165 aaKnown RBP15.11■□□□□ 0.01
SCARF1-205ENST00000571272 OR4D5Q8NGN0 318 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 TCEAL7Q9BRU2 100 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 BCO1Q9HAY6 547 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 ZIC3O60481 467 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 NXPH3O95157 252 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 RD3LP0DJH9 198 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 B4GALT1P15291 398 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 NTF4P34130 210 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 EIF2S3P41091 472 aaKnown RBP15.11■□□□□ 0.01
SCARF1-205ENST00000571272 SRXN1Q9BYN0 137 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF700Q9H0M5 742 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 OR51M1Q9H341 326 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 TMED3Q9Y3Q3 217 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 CEP192Q8TEP8 1941 aa15.11■□□□□ 0.01
SCARF1-205ENST00000571272 IGSF23A1L1A6 192 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 SYNGR3O43761 229 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 OR7C1O76099 320 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-205ENST00000571272 VAMP5O95183 116 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 CCL7P80098 99 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 HAGHQ16775 308 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 OR1F12Q8NHA8 337 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 PIGCQ92535 297 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 ALKBH3Q96Q83 286 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-205ENST00000571272 DKKL1Q9UK85 242 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 C3orf85A0A1B0GTC6 90 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF724A8MTY0 619 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 SSSCA1O60232 199 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 YIF1AO95070 293 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF32P17041 273 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 HTR5AP47898 357 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 MRPS34P82930 218 aaKnown RBP15.1■□□□□ 0.01
SCARF1-205ENST00000571272 SPIN3Q5JUX0 258 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 EDARADDQ8WWZ3 215 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 IGHV5-10-1A0A0J9YXX1 117 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 MPPED1O15442 326 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 PPYP01298 95 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 FBP1P09467 338 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 MALLQ13021 153 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 RAB35Q15286 201 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 LHFPL2Q6ZUX7 228 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 TMEM217Q8N7C4 229 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 CCDC71LQ8N9Z2 235 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 TMEM171Q8WVE6 324 aa15.1■□□□□ 0.01
SCARF1-205ENST00000571272 RBFOX3A6NFN3 312 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 TERTO14746 1132 aaKnown RBP15.09■□□□□ 0.01
SCARF1-205ENST00000571272 CST7O76096 145 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 TCN2P20062 427 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 NKX2-1P43699 371 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-205ENST00000571272 CXorf66Q5JRM2 361 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-205ENST00000571272 LFNGQ8NES3 379 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 OR14L1PQ8NHC6 308 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 BCL2L14Q9BZR8 327 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 UBE2J1Q9Y385 318 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-205ENST00000571272 URGCP-MRPS24S4R325 110 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 ATXN7O15265 892 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-205ENST00000571272 PDCD6O75340 191 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 IFNA17P01571 189 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 LIFP15018 202 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF92Q03936 586 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 PLCXD3Q63HM9 321 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 CCDC54Q8NEL0 328 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 MR1Q95460 341 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 NTNG2Q96CW9 530 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 MALSU1Q96EH3 234 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 OCIAD1Q9NX40 245 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 SLC7A11Q9UPY5 501 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 LIPGQ9Y5X9 500 aa15.09■□□□□ 0.01
SCARF1-205ENST00000571272 TOX3O15405 576 aaPredicted RBP15.08■□□□□ 0.01
SCARF1-205ENST00000571272 ZNHIT1O43257 154 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 S100PP25815 95 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 NPBWR2P48146 333 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 RAB1AP62820 205 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 KIAA0141Q14154 515 aaPredicted RBP15.08■□□□□ 0.01
SCARF1-205ENST00000571272 PCOLCEQ15113 449 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF343Q6P1L6 599 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 HEPN1Q6WQI6 88 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 CALHM1Q8IU99 346 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 CCDC74BQ96LY2 380 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 PROK2Q9HC23 129 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 WNT16Q9UBV4 365 aa15.08■□□□□ 0.01
SCARF1-205ENST00000571272 ZNF407Q9C0G0 2248 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 PI4KAP42356 2102 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 A0A087WZY1 265 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 H0YL77 283 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 H3BQ15 152 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 GNRHRP30968 328 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 RND3P61587 244 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 SPSB3Q6PJ21 355 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 ASCL4Q6XD76 172 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 ZNF695Q8IW36 515 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 OR5C1Q8NGR4 320 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 FGFBP3Q8TAT2 258 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 SLC7A10Q9NS82 523 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 FREM2Q5SZK8 3169 aa15.08■□□□□ 0
SCARF1-205ENST00000571272 PPIHO43447 177 aaKnown RBP15.07■□□□□ 0
SCARF1-205ENST00000571272 DSCR4P56555 118 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms