RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TUBAL3A6NHL2 446 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 LEUTXA8MZ59 168 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 OR2F2O95006 317 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 IFNA2P01563 188 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 PSMB6P28072 239 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 CALCRP30988 508 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 IL24Q13007 206 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 OR2F1Q13607 317 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 SLC51BQ86UW2 128 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 KCNRGQ8N5I3 272 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 PKIBQ9C010 78 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 OR2J1Q9GZK6 312 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 WDR13Q9H1Z4 485 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 DKK4Q9UBT3 224 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 KLK10O43240 276 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF205O95201 554 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 HOXC12P31275 282 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF585AQ6P3V2 769 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 LINC00596Q86U02 117 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 SGPP2Q8IWX5 399 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 PCNPQ8WW12 178 aaKnown RBP15.5■□□□□ 0.07
SMPD3-211ENST00000568373 CCDC120Q96HB5 630 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 OR51I2Q9H344 312 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 PLSCR4Q9NRQ2 329 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 MBD2Q9UBB5 411 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 INTS1Q8N201 2190 aaKnown RBP15.5■□□□□ 0.07
SMPD3-211ENST00000568373 GTF3C1Q12789 2109 aa15.5■□□□□ 0.07
SMPD3-211ENST00000568373 RNF222A6NCQ9 220 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 CRYM-AS1A6NIL9 109 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF728P0DKX0 622 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 CBR1P16152 277 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 PRKACAP17612 351 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 FCGR2CP31995 323 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 EIF2S3P41091 472 aaKnown RBP15.49■□□□□ 0.07
SMPD3-211ENST00000568373 ATXN7L3Q14CW9 347 aaPredicted RBP15.49■□□□□ 0.07
SMPD3-211ENST00000568373 PLEKHN1Q494U1 663 aaPredicted RBP15.49■□□□□ 0.07
SMPD3-211ENST00000568373 Q6ZS49 121 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 Q6ZS92 163 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 ACOT7LQ6ZUV0 252 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 TOMM40LQ969M1 308 aa15.49■□□□□ 0.07
SMPD3-211ENST00000568373 NAPSAO96009 420 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 IGKV3-15P01624 115 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 RBMXP38159 391 aaKnown RBP15.48■□□□□ 0.07
SMPD3-211ENST00000568373 UCP2P55851 309 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 ERVS71-1P61550 626 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 SRSF7Q16629 238 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMPD3-211ENST00000568373 ESCO2Q56NI9 601 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 WDR31Q8NA23 367 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF488Q96MN9 340 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 MICU1Q9BPX6 476 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 RTL8AQ9BWD3 113 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 METTL8Q9H825 291 aaKnown RBP15.48■□□□□ 0.07
SMPD3-211ENST00000568373 TEX13DA0A0J9YY54 714 aaPredicted RBP15.48■□□□□ 0.07
SMPD3-211ENST00000568373 MPTX1A8MV57 137 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 J3QT63 122 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 TNFSF13O75888 250 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 RAC2P15153 192 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 SPINK2P20155 84 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 GLP1RP43220 463 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 PIGPP57054 158 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 ALKAL2Q6UX46 152 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 SLC25A40Q8TBP6 338 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 SCARB1Q8WTV0 552 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 VRK1Q99986 396 aaPredicted RBP15.48■□□□□ 0.07
SMPD3-211ENST00000568373 SPACA1Q9HBV2 294 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 C1orf123Q9NWV4 160 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 KIF25Q9UIL4 384 aa15.48■□□□□ 0.07
SMPD3-211ENST00000568373 PDGFAP04085 211 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 DUSP1P28562 367 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 FXYD4P59646 89 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 FAM58AQ8N1B3 248 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 OR1J1Q8NGS3 322 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MOB3AQ96BX8 217 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 PIK3IP1Q96FE7 263 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 Q9N2K0 584 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MGAQ8IWI9 3026 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 TRBV6-7A0A0A0MS04 114 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 KANTRA0A1W2PQU2 76 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MBD3L4A6NDZ8 208 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MBD3L3A6NE82 208 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MBD3L5A6NJ08 208 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 RHBDL1O75783 438 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 SPDEFO95238 335 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 IL13RA2Q14627 380 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 FAM76BQ5HYJ3 339 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 INO80EQ8NBZ0 244 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 MBD3L2Q8NHZ7 208 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 SNIP1Q8TAD8 396 aaKnown RBP15.47■□□□□ 0.07
SMPD3-211ENST00000568373 OR10C1Q96KK4 312 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 C2orf50Q96LR7 162 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 C1QTNF6Q9BXI9 259 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 PROCRQ9UNN8 238 aa15.47■□□□□ 0.07
SMPD3-211ENST00000568373 LRP5LA4QPB2 252 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 IQCF6A8MYZ5 107 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 HSPB6O14558 160 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 BCL2L11O43521 198 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 WDR1O75083 606 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 AGFG2O95081 481 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 HOXB5P09067 269 aa15.46■□□□□ 0.07
SMPD3-211ENST00000568373 UCP3P55916 312 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms