RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 FAM118AQ9NWS6 357 aa10.91□□□□□ -0.66
USB1-205ENST00000561743 TCF19Q9Y242 345 aa10.91□□□□□ -0.66
USB1-205ENST00000561743 GSTK1Q9Y2Q3 226 aa10.91□□□□□ -0.66
USB1-205ENST00000561743 SESN1Q9Y6P5 492 aa10.91□□□□□ -0.66
USB1-205ENST00000561743 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 TMEM212A6NML5 194 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 MMP23AO75900 390 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 OR2H2O95918 312 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 ERP29P30040 261 aaKnown RBP10.9□□□□□ -0.66
USB1-205ENST00000561743 P2RX3P56373 397 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 DYNC1I2Q13409 638 aaKnown RBP10.9□□□□□ -0.66
USB1-205ENST00000561743 FAM189A2Q15884 450 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 SAXO1Q8IYX7 474 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 PARP16Q8N5Y8 322 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 OR52I1Q8NGK6 324 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 OR2T6Q8NHC8 308 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 PDCD1LG2Q9BQ51 273 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 NPFFR1Q9GZQ6 430 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 COMMD4Q9H0A8 199 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 NEK6Q9HC98 313 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 EXOSC4Q9NPD3 245 aaKnown RBP10.9□□□□□ -0.66
USB1-205ENST00000561743 MRPS18AQ9NVS2 196 aaKnown RBP10.9□□□□□ -0.66
USB1-205ENST00000561743 GLS2Q9UI32 602 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 FOXJ3Q9UPW0 622 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 UBE2J1Q9Y385 318 aaPredicted RBP10.9□□□□□ -0.66
USB1-205ENST00000561743 TGP01266 2768 aa10.9□□□□□ -0.66
USB1-205ENST00000561743 A6NDX4 124 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 SH2D1BO14796 132 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 SULT1B1O43704 296 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 ALX3O95076 343 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 HCKP08631 526 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 JUNBP17275 347 aaPredicted RBP10.89□□□□□ -0.67
USB1-205ENST00000561743 LMO1P25800 156 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 ZP1P60852 638 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
USB1-205ENST00000561743 HERPUD1Q15011 391 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 SMN1Q16637 294 aaKnown RBP10.89□□□□□ -0.67
USB1-205ENST00000561743 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 TRAPPC6BQ86SZ2 158 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 TMEM219Q86XT9 240 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 OR5AK2Q8NH90 309 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 RPS4Y2Q8TD47 263 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 CFHR4Q92496 578 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
USB1-205ENST00000561743 CDCA4Q9BXL8 241 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 CLEC7AQ9BXN2 247 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 TMEM133Q9H2Q1 129 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 ZNF702PQ9H963 129 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 RHOFQ9HBH0 211 aa10.89□□□□□ -0.67
USB1-205ENST00000561743 RPL36Q9Y3U8 105 aaKnown RBP10.89□□□□□ -0.67
USB1-205ENST00000561743 A0A0G2JK05 382 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 EBAG9O00559 213 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 WBP4O75554 376 aaKnown RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 CCDC159P0C7I6 412 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 GLIPR1P48060 266 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 DYNLT3P51808 116 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 AESQ08117 197 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 IL18R1Q13478 541 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 HABP2Q14520 560 aaPredicted RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 KISS1Q15726 138 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 MINOS1Q5TGZ0 78 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 Q6P435 159 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 BAIAP2L2Q6UXY1 529 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 Q6ZTK2 550 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 Q8N2B8 174 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 OR5D14Q8NGL3 314 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 TSEN15Q8WW01 171 aaKnown RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 RGP1Q92546 391 aaPredicted RBP10.88□□□□□ -0.67
USB1-205ENST00000561743 JAM3Q9BX67 310 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 ABCB10Q9NRK6 738 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 DHDHQ9UQ10 334 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 PCDHGB5Q9Y5G0 923 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 HILPDAQ9Y5L2 63 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 MINOS1-NBL1R4GNA1 71 aa10.88□□□□□ -0.67
USB1-205ENST00000561743 TRGV10A0A0A0MS01 117 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 SLC33A1O00400 549 aaPredicted RBP10.87□□□□□ -0.67
USB1-205ENST00000561743 CSN2P05814 226 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 CSF1P09603 554 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 TMEM225BP0DP42 221 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 VSIG10L2P0DP72 767 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 ZNF44P15621 663 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 GBX2P52951 348 aaPredicted RBP10.87□□□□□ -0.67
USB1-205ENST00000561743 SCN1BQ07699 218 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 CDK5R1Q15078 307 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 KLHL22Q53GT1 634 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 PRAMEF5Q5TYX0 476 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 LPCAT4Q643R3 524 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 ZNF529Q6P280 563 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
USB1-205ENST00000561743 CHST4Q8NCG5 386 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms