RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 OR4A5Q8NH83 315 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 FAM81AQ8TBF8 368 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 ZFAND1Q8TCF1 268 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 SPZ1Q9BXG8 430 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 GEMIN7Q9H840 131 aaKnown RBP0.18□□□□□ -2.38
CASC4-211ENST00000561305 C20orf96Q9NUD7 363 aaPredicted RBP0.18□□□□□ -2.38
CASC4-211ENST00000561305 TFR2Q9UP52 801 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 COL18A1P39060 1754 aa0.18□□□□□ -2.38
CASC4-211ENST00000561305 A0A075B6Q4 140 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 AGTP01019 485 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 GPR1P46091 355 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 CLEC12AQ5QGZ9 265 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 FAM122BQ7Z309 247 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 NIT1Q86X76 327 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 HIST1H2BAQ96A08 127 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 ARL6Q9H0F7 186 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 DOK5Q9P104 306 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 RPUSD1Q9UJJ7 312 aaKnown RBP0.17□□□□□ -2.38
CASC4-211ENST00000561305 KLF12Q9Y4X4 402 aa0.17□□□□□ -2.38
CASC4-211ENST00000561305 LOC102725191A0A1B0GVB3 256 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 H3BN98 237 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 MSR1P21757 451 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 MAGEA12P43365 314 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 PAFAH1B2P68402 229 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 CTAG1AP78358 180 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 ZCWPW2Q504Y3 356 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 BEX5Q5H9J7 111 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 UBE2NLQ5JXB2 153 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 LGALS9CQ6DKI2 356 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 THOC7Q6I9Y2 204 aaKnown RBP0.16□□□□□ -2.38
CASC4-211ENST00000561305 GLYATQ6IB77 296 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 OR6K6Q8NGW6 343 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 CMBLQ96DG6 245 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 CAPZA3Q96KX2 299 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 METTL26Q96S19 204 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 Q9BRP9 147 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 TSSK6Q9BXA6 273 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 GCNT4Q9P109 453 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 AP3M1Q9Y2T2 418 aa0.16□□□□□ -2.38
CASC4-211ENST00000561305 CD300LBA8K4G0 201 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 EEF1E1O43324 174 aaKnown RBP0.15□□□□□ -2.39
CASC4-211ENST00000561305 GUSBP08236 651 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 SOD3P08294 240 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 UBCP0CG48 685 aaKnown RBP0.15□□□□□ -2.39
CASC4-211ENST00000561305 CLDN6P56747 220 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 IRF8Q02556 426 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 RAD51Q06609 339 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 KRTAP19-3Q7Z4W3 81 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 LUZP2Q86TE4 346 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 CCNYL1Q8N7R7 359 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 MCUR1Q96AQ8 359 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 NAA50Q9GZZ1 169 aaKnown RBP0.15□□□□□ -2.39
CASC4-211ENST00000561305 ADA2Q9NZK5 511 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 FBXL3Q9UKT7 428 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 FLVCR2Q9UPI3 526 aa0.15□□□□□ -2.39
CASC4-211ENST00000561305 C14orf166Q9Y224 244 aaKnown RBP0.15□□□□□ -2.39
CASC4-211ENST00000561305 SLC22A20A6NK97 555 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 OR2AT4A6NND4 320 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 TEX46H3BTG2 121 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 DFFAO00273 331 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 GCGP01275 180 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 CRABP1P29762 137 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 YWHAEP62258 255 aaKnown RBP0.14□□□□□ -2.39
CASC4-211ENST00000561305 TOMM34Q15785 309 aaPredicted RBP0.14□□□□□ -2.39
CASC4-211ENST00000561305 MARCH3Q86UD3 253 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 COA5Q86WW8 74 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 FER1L6-AS1Q8NA97 138 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 RILPQ96NA2 401 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 ZNF436Q9C0F3 470 aaPredicted RBP0.14□□□□□ -2.39
CASC4-211ENST00000561305 HEY1Q9Y5J3 304 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 SOX21Q9Y651 276 aaPredicted RBP0.14□□□□□ -2.39
CASC4-211ENST00000561305 DENND4BO75064 1496 aaPredicted RBP0.14□□□□□ -2.39
CASC4-211ENST00000561305 RTTNQ86VV8 2226 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 USP24Q9UPU5 2620 aa0.14□□□□□ -2.39
CASC4-211ENST00000561305 ZNF701M0R085 212 aaPredicted RBP0.13□□□□□ -2.39
CASC4-211ENST00000561305 TRDMT1O14717 391 aaKnown RBP0.13□□□□□ -2.39
CASC4-211ENST00000561305 CPLX1O14810 134 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 GYPCP04921 128 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 SCGB1C2P0DMR2 95 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 TAC1P20366 129 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 GSTM3P21266 225 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 ATP6V0D1P61421 351 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 SPANXN2Q5MJ10 180 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 TIMM23BQ5SRD1 257 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 TMEM53Q6P2H8 277 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 OR11G2Q8NGC1 345 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 SCGB1C1Q8TD33 95 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 TSEN15Q8WW01 171 aaKnown RBP0.13□□□□□ -2.39
CASC4-211ENST00000561305 ADTRPQ96IZ2 230 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 PLIN2Q99541 437 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 ELOVL6Q9H5J4 265 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 MRPS16Q9Y3D3 137 aaKnown RBP0.13□□□□□ -2.39
CASC4-211ENST00000561305 PHLDA3Q9Y5J5 127 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 MINOS1-NBL1R4GNA1 71 aa0.13□□□□□ -2.39
CASC4-211ENST00000561305 YLPM1P49750 1951 aaKnown RBP0.12□□□□□ -2.39
CASC4-211ENST00000561305 POLR3AO14802 1390 aaPredicted RBP0.12□□□□□ -2.39
CASC4-211ENST00000561305 IGHV1-45A0A0A0MS14 117 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 SLC5A10A0PJK1 596 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 RNF113AO15541 343 aaKnown RBP0.12□□□□□ -2.39
CASC4-211ENST00000561305 SLC25A20O43772 301 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms