RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LSM5Q9Y4Y9 91 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 CHCHD2Q9Y6H1 151 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 IGHV1-45A0A0A0MS14 117 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 CER1O95813 267 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 OPN1LWP04000 364 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 CCL4P13236 92 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 AMY2BP19961 511 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 OR3A2P47893 321 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 FHITP49789 147 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 DUSP3P51452 185 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 PNRC1Q12796 327 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 COA6Q5JTJ3 125 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 C11orf40Q8WZ69 217 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 MRPL13Q9BYD1 178 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF700Q9H0M5 742 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 V9GYS6 101 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 EML6Q6ZMW3 1958 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 TP53I11O14683 189 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 DLEU1O43261 78 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 PI3P19957 117 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 G0S2P27469 103 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 MMP16P51512 607 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 ZXDAP98168 799 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 IL13RA2Q14627 380 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 DCAF10Q5QP82 559 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 UEVLDQ8IX04 471 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 RNF133Q8WVZ7 376 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 RARRES2Q99969 163 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 CDH20Q9HBT6 801 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 GOLT1BQ9Y3E0 138 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
RABGGTA-220ENST00000560998 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 AMBPP02760 352 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 H2BFMP0C1H6 154 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 NR2C1P13056 603 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 GLRA1P23415 457 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 PTGER4P35408 488 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 RAB35Q15286 201 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 JSRP1Q96MG2 331 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 SNHG12Q9BXW3 62 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 WFDC1Q9HC57 220 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 H0YL77 283 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 CLDN34H7C241 214 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 TRAF3IP2O43734 574 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 TK1P04183 234 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 COX6A1P12074 109 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 EPHA1P21709 976 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 RND3P61587 244 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 HLA-DRB3P79483 266 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 EXT1Q16394 746 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 C21orf62-AS1Q17RA5 79 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 TRIM61Q5EBN2 209 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 THEM4Q5T1C6 240 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 SLC16A14Q7RTX9 510 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 NOXO1Q8NFA2 376 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 KCNG3Q8TAE7 436 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 RBMXL1Q96E39 390 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 CENPMQ9NSP4 180 aa12.16□□□□□ -0.46
RABGGTA-220ENST00000560998 LOC101059948A0A1B0GTJ6 334 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 C1QL1O75973 258 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 IL18BPO95998 194 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 OPN1MWP04001 364 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 CTSDP07339 412 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 PGA4P0DJD7 388 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 PGA3P0DJD8 388 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 OPN1MW2P0DN77 364 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 OPN1MW3P0DN78 364 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 RGS19P49795 217 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 CLRN1P58418 232 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF266Q14584 549 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM176BQ3YBM2 270 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 SLC25A26Q70HW3 274 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 C1orf210Q8IVY1 113 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 OR1P1Q8NH06 330 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 SNX22Q96L94 193 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
RABGGTA-220ENST00000560998 FAM230AA0A1W2PPH8 454 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 STMND1H3BQB6 276 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms