RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TEX37Q96LM6 180 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 FMO2Q99518 471 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 DOK1Q99704 481 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 CCT7Q99832 543 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 SH3GL3Q99963 347 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 WFDC6Q9BQY6 131 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 SLC35A5Q9BS91 424 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 NICN1Q9BSH3 213 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 RSPO3Q9BXY4 272 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-219ENST00000556413 RAB1BQ9H0U4 201 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 PIGUQ9H490 435 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 FANCFQ9NPI8 374 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 RRAGDQ9NQL2 400 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-219ENST00000556413 GLRX2Q9NS18 164 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 ACER3Q9NUN7 267 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 NMRK1Q9NWW6 199 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 C1orf109Q9NX04 203 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 PAQR5Q9NXK6 330 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-219ENST00000556413 EMC3Q9P0I2 261 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 TAAR3PQ9P1P4 343 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 OR1A1Q9P1Q5 309 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 MARCOQ9UEW3 520 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-219ENST00000556413 IL20RAQ9UHF4 553 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 OPN4Q9UHM6 478 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 ANGPT4Q9Y264 503 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 STK38LQ9Y2H1 464 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 WDR45Q9Y484 360 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 MALRD1Q5VYJ5 2156 aa1.89□□□□□ -2.11
SCFD1-219ENST00000556413 PLECQ15149 4684 aaKnown RBP1.89□□□□□ -2.11
SCFD1-219ENST00000556413 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 IGKV1D-42A0A075B6H8 117 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 IGKV1D-43A0A0B4J1Z2 117 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GOLGA8QA0A0J9YX86 632 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GOLGA8OA6NCC3 632 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GOLGA8NF8WBI6 632 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 H3BNH8 94 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 H7C1C5 153 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 M0R233 179 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 KIF2AO00139 706 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 HMGN4O00479 90 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 RIPK2O43353 540 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TRAF3IP2O43734 574 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 STX11O75558 287 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 RP2O75695 350 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 ANP32DO95626 131 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 PNPP00491 289 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV2-5P01817 119 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OPN1SWP03999 348 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TFF1P04155 84 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 SNRPAP09012 282 aaKnown RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TACSTD2P09758 323 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR8G3PP0DMU2 310 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 FUT1P19526 365 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 NCF2P19878 526 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 VDAC1P21796 283 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 BGNP21810 368 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 HTR2AP28223 471 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 IL12AP29459 219 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 AQP1P29972 269 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GRPRP30550 384 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 SERPINB9P50453 376 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 POLR2HP52434 150 aaKnown RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 PKNOX1P55347 436 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 LCN6P62502 163 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 ELF3P78545 371 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 HPCAP84074 193 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 C1DQ13901 141 aaKnown RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 SLC9A3R2Q15599 337 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF141Q15928 474 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 LRRC36Q1X8D7 754 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TRMT5Q32P41 509 aaKnown RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 C2orf76Q3KRA6 126 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 C1orf140Q5VVS0 124 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 WDR88Q6ZMY6 472 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 EIF3MQ7L2H7 374 aaKnown RBP1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GRINAQ7Z429 371 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 PPP1R27Q86WC6 154 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 MISPQ8IVT2 679 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR5AS1Q8N127 324 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 C10orf111Q8N326 155 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 PNKDQ8N490 385 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 CLDN22Q8N7P3 220 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR2T33Q8NG76 320 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR9I1Q8NGQ6 314 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 AKR7LQ8NHP1 331 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 MGARPQ8TDB4 240 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 C7orf33Q8WU49 177 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR5P2Q8WZ92 322 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 ST8SIA1Q92185 356 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 CCL17Q92583 94 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TUBGCP3Q96CW5 907 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 DDIT4LQ96D03 193 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 CCDC126Q96EE4 140 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 ZHX1-C8orf76Q96EF9 292 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 DTNBP1Q96EV8 351 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 OR2M2Q96R28 347 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 STACQ99469 402 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 GAL3ST1Q99999 423 aa1.88□□□□□ -2.11
SCFD1-219ENST00000556413 TAPBPLQ9BX59 468 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms