RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 ZNF782Q6ZMW2 699 aaPredicted RBP12.51□□□□□ -0.41
BRF1-220ENST00000552127 Q6ZSV7 163 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 TSEN15Q8WW01 171 aaKnown RBP12.51□□□□□ -0.41
BRF1-220ENST00000552127 AJUBAQ96IF1 538 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 PDCD1LG2Q9BQ51 273 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 ZCCHC4Q9H5U6 513 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 NEK6Q9HC98 313 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 C8orf4Q9NR00 106 aa12.51□□□□□ -0.41
BRF1-220ENST00000552127 IGKV1-12A0A0C4DH73 117 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 H3BUX3 64 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 KDM4BO94953 1096 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 IGKV1D-12P01611 117 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 CALCBP10092 127 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 GABRR1P24046 479 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 PEX2P28328 305 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 DUSP1P28562 367 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 SNU13P55769 128 aaKnown RBP12.5□□□□□ -0.41
BRF1-220ENST00000552127 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
BRF1-220ENST00000552127 GRK1Q15835 563 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 PACRGLQ8N7B6 248 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 ZSCAN4Q8NAM6 433 aaPredicted RBP12.5□□□□□ -0.41
BRF1-220ENST00000552127 OR5D18Q8NGL1 313 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 CNIH3Q8TBE1 160 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 CHST6Q9GZX3 395 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 HMG20AQ9NP66 347 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 DHDHQ9UQ10 334 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
BRF1-220ENST00000552127 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 MEX3AA1L020 520 aaKnown RBP12.49□□□□□ -0.41
BRF1-220ENST00000552127 SULT1B1O43704 296 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 PSPNO60542 156 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 CLIC3O95833 236 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 HCKP08631 526 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 OR3A1P47881 315 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 RCN1Q15293 331 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 TTC23Q5W5X9 447 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 SERPINA12Q8IW75 414 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 PARP16Q8N5Y8 322 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 RGP1Q92546 391 aaPredicted RBP12.49□□□□□ -0.41
BRF1-220ENST00000552127 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 SSX3Q99909 188 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 C16orf95Q9H693 158 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 EXOSC4Q9NPD3 245 aaKnown RBP12.49□□□□□ -0.41
BRF1-220ENST00000552127 LINC00312Q9Y6C7 94 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 TENM2Q9NT68 2774 aa12.49□□□□□ -0.41
BRF1-220ENST00000552127 SIRPB1O00241 398 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 MGST3O14880 152 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 DCKP27707 260 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 TGFBR2P37173 567 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 ETV1P50549 477 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 GTF2A1P52655 376 aaPredicted RBP12.48□□□□□ -0.41
BRF1-220ENST00000552127 LGALS4P56470 323 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 CDK5R1Q15078 307 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 AANATQ16613 207 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 CCDC58Q4VC31 144 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 OR4S1Q8NGB4 309 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 OR5D14Q8NGL3 314 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 PHF21AQ96BD5 680 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 SACSQ9NZJ4 4579 aa12.48□□□□□ -0.41
BRF1-220ENST00000552127 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 SH2D1BO14796 132 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 OR2H2O95918 312 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 ARG1P05089 322 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 PAX6P26367 422 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 P2RX3P56373 397 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 ZP1P60852 638 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 ADARB1P78563 741 aaKnown RBP12.47□□□□□ -0.41
BRF1-220ENST00000552127 IL18R1Q13478 541 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 KISS1Q15726 138 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 OR2G6Q5TZ20 316 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 RPL22L1Q6P5R6 122 aaKnown RBP12.47□□□□□ -0.41
BRF1-220ENST00000552127 TMPRSS11AQ6ZMR5 421 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
BRF1-220ENST00000552127 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
BRF1-220ENST00000552127 CPNE2Q96FN4 548 aaPredicted RBP12.47□□□□□ -0.41
BRF1-220ENST00000552127 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms