RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 A0A087WZY1 265 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 A0A0U1RQV5 110 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 CDRT15L2A8MXV6 281 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 GPR37O15354 613 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 SCTP09683 121 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FAM3AP98173 230 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FAHD2BQ6P2I3 314 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FAHD2AQ96GK7 314 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 WDR54Q9H977 334 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 UQCC1Q9NVA1 299 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FOXJ2Q9P0K8 574 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 IL17BQ9UHF5 180 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 ARHGAP21Q5T5U3 1957 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 SYNGR3O43761 229 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 HKR1P10072 659 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 SRD5A2P31213 254 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 MIDNQ504T8 468 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 OR2B11Q5JQS5 317 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 OR2T2Q6IF00 324 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 TFAP2EQ6VUC0 442 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 EXTL1Q92935 676 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 CNTNAP3Q9BZ76 1288 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 HEATR1Q9H583 2144 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 LPAR3Q9UBY5 353 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF107Q9UII5 783 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 USF3Q68DE3 2245 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 SYNGR4O95473 234 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 RAB1AP62820 205 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 ZFP62Q8NB50 900 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 POC1AQ8NBT0 407 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 OR14J1Q9UGF5 321 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 IGLV3-32A0A0A0MS00 114 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 SNAPC5O75971 98 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF133P52736 654 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 OR10Z1Q8NGY1 313 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 M1APQ8TC57 530 aa11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 FOXD3Q9UJU5 478 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-209ENST00000548825 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 TRIM77I1YAP6 450 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 SYNGR1O43759 233 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 CALCRP30988 508 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 VAMP2P63027 116 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 GNMTQ14749 295 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 C10orf128Q5T292 105 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 EIF5AL1Q6IS14 154 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 GGNQ86UU5 652 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 CPT1CQ8TCG5 803 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 C14orf79Q96F83 325 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 STARD10Q9Y365 291 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 V9GYS6 101 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 LOC102725191A0A1B0GVB3 256 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 LRRC3CA6NJW4 275 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 RNASEK-C17orf49H0YIS7 233 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 PRDX4Q13162 271 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 OR1C1Q15619 314 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 SLC35G3Q8N808 338 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 TP53RKQ96S44 253 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 MYOZ1Q9NP98 299 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 FZR1Q9UM11 496 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 C9JQL5 133 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 MSTNO14793 375 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 LILRA1O75019 489 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 DKK1O94907 266 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 CA6P23280 308 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 PMP22Q01453 160 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 LTC4SQ16873 150 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF552Q9H707 407 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
PRPF40B-209ENST00000548825 PLCE1Q9P212 2302 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF716A6NP11 495 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 CCL1P22362 96 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 KCNJ3P48549 501 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 LHFPL1Q86WI0 220 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 SPSB1Q96BD6 273 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF816-ZNF321PA0A0X1KG74 233 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 TRAPPC2LH3BP13 241 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ARG1P05089 322 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 RPS2P15880 293 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 MPLP40238 635 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 PLP2Q04941 152 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF239Q16600 458 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms