RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 PLK3Q9H4B4 646 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 Q9H521 79 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 ZNF696Q9H7X3 374 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 FN3KRPQ9HA64 309 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 SEBOXQ9HB31 216 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 ELF5Q9UKW6 265 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 PPP1R3CQ9UQK1 317 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 POLR1DQ9Y2S0 133 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 CMAHPQ9Y471 501 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 NOTCH2Q04721 2471 aa5.36□□□□□ -1.55
ATPAF1-209ENST00000529214 SPG11Q96JI7 2443 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ROS1P08922 2347 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 A0A1B0GV72 72 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 F8W735 103 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 SSX4O60224 188 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ZNF780AO75290 641 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 TNFAIP8O95379 198 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 BRI3O95415 125 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 NGFP01138 241 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 H2AFB1P0C5Y9 115 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ZNF250P15622 560 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 CDKN1AP38936 164 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RPS19P39019 145 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 CEACAM3P40198 252 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RPS27P42677 84 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 MAP2K4P45985 399 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 HTR5AP47898 357 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 PTH2RP49190 550 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ART1P52961 327 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 TMEM33P57088 247 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RPS23P62266 143 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ECH1Q13011 328 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 APOFQ13790 326 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RAB35Q15286 201 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 KRTAP27-1Q3LI81 207 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RNASE10Q5GAN6 216 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 NXNL2Q5VZ03 156 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ARL9Q6T311 187 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 UNQ6126/PRO20091Q6UXV3 157 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 SHFQ7M4L6 423 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 DPY19L4Q7Z388 723 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ZNF101Q8IZC7 436 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 OR10S1Q8NGN2 331 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 OR1J1Q8NGS3 322 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 OR6K6Q8NGW6 343 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 TMEM163Q8TC26 289 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 SLC7A6Q92536 515 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 GCDHQ92947 438 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ERGIC1Q969X5 290 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 MRPL24Q96A35 216 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 SPSB1Q96BD6 273 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ZMYND19Q96E35 227 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 MISP3Q96FF7 219 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 TRMT61AQ96FX7 289 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 IL4I1Q96RQ9 567 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 DCLRE1CQ96SD1 692 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 PITX2Q99697 317 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 SHARPINQ9H0F6 387 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ELOVL3Q9HB03 270 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 ORC6Q9Y5N6 252 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 DSCAMO60469 2012 aa5.35□□□□□ -1.55
ATPAF1-209ENST00000529214 RTTNQ86VV8 2226 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 VPS13CQ709C8 3753 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 IGLV3-9A0A075B6K5 115 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 MEIOCA2RUB1 952 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 CCDC182A6NF36 153 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 H3BSA7 217 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 H7C417 338 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SULT1C2O00338 296 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 DLGAP1O14490 977 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 NDUFS7O75251 213 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 RBMXL2O75526 392 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 PTTG1O95997 202 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 IGHV3-13P01766 116 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 DBHP09172 617 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ALOX5APP20292 161 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OTX1P32242 354 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 DDOSTP39656 456 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 KCNJ3P48549 501 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SNU13P55769 128 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ATP5J2P56134 94 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 CDC42P60953 191 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 PPP1CBP62140 327 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 IL13RA1P78552 427 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 IL5RAQ01344 420 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 MVKQ03426 396 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 P2RY14Q15391 338 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 BSXQ3C1V8 233 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ZNF718Q3SXZ3 478 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SLC25A30Q5SVS4 291 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ATAD3CQ5T2N8 411 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 LPCAT4Q643R3 524 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 BTNL3Q6UXE8 466 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 MEPCEQ7L2J0 689 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 MRPL21Q7Z2W9 205 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 BCDIN3DQ7Z5W3 292 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms