RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 GABRG1Q8N1C3 465 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SLCO5A1Q9H2Y9 848 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 STEAP1Q9UHE8 339 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SELENOKQ9Y6D0 94 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 PLCE1Q9P212 2302 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ANKRD20A5PA0PJZ0 165 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SNRPGP15A8MWD9 76 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SDCBPO00560 298 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 CCL21O00585 134 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 XRCC2O43543 280 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 IGHA1P01876 353 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 H2BFMP0C1H6 154 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 FKBP2P26885 142 aaKnown RBP7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 HOXC12P31275 282 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 APLNRP35414 380 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 TAS2R43P59537 309 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 TAS2R60P59551 318 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 UBE2KP61086 200 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC25A24Q6NUK1 477 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 THNSL2Q86YJ6 484 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF101Q8IZC7 436 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF283Q8N7M2 679 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 PNLDC1Q8NA58 520 aaKnown RBP7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 OR5AP2Q8NGF4 316 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 OR5AK2Q8NH90 309 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 DKK4Q9UBT3 224 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 KCNK7Q9Y2U2 307 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2F2O95006 317 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 AGFG2O95081 481 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 WNT11O96014 354 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 IDH3GP51553 393 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF85Q03923 595 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2F1Q13607 317 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 RHEBQ15382 184 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 MPPED2Q15777 294 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC43A2Q8N370 569 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ZIC4Q8N9L1 334 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ADGRG7Q96K78 797 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ELOVL3Q9HB03 270 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 ADGRL4Q9HBW9 690 aa7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 VSX1Q9NZR4 365 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-209ENST00000509277 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 TRAV8-7A0A075B6U6 113 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF716A6NP11 495 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2A4O95047 310 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 CSF1P09603 554 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PGA4P0DJD7 388 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PGA3P0DJD8 388 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PSMB6P28072 239 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ARFRP1Q13795 201 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 SUMF2Q8NBJ7 301 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF519Q8TB69 540 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 CMTM3Q96MX0 182 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2A7Q96R45 310 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 FOXB1Q99853 325 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 RCC2Q9P258 522 aaKnown RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 GAB2Q9UQC2 676 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 IGHV3-64DA0A0J9YX35 117 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 DBHP09172 617 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 GLYATL3Q5SZD4 288 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 STAC2Q6ZMT1 411 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ERASQ7Z444 233 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 RNF128Q8TEB7 428 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 NPTNQ9Y639 398 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 AQP7O14520 342 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PIN1P1O15428 100 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 TGOLN2O43493 480 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 GAAP10253 952 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 H3F3AP84243 136 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 THEM4Q5T1C6 240 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 LIPNQ5VXI9 398 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 GGNBP1Q5YKI7 109 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 VHLLQ6RSH7 139 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ADAD2Q8NCV1 583 aaKnown RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PACRGQ96M98 296 aaPredicted RBP7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ST6GALNAC5Q9BVH7 336 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 SEC11CQ9BY50 192 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 COMMD4Q9H0A8 199 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 PROCRQ9UNN8 238 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC22A13Q9Y226 551 aa7.54□□□□□ -1.2
LIMCH1-209ENST00000509277 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
LIMCH1-209ENST00000509277 TRAV34A0A0B4J273 112 aa7.53□□□□□ -1.2
LIMCH1-209ENST00000509277 EREGO14944 169 aa7.53□□□□□ -1.2
LIMCH1-209ENST00000509277 FCGR2AP12318 317 aa7.53□□□□□ -1.2
LIMCH1-209ENST00000509277 MMP9P14780 707 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms