RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ANGPTL6Q8NI99 470 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 DYRK2Q92630 601 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 RAB1CQ92928 201 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 GCDHQ92947 438 aaPredicted RBP16.2■□□□□ 0.18
USP39-218ENST00000493829 RAB3CQ96E17 227 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 WDFY2Q96P53 400 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 TMEM246Q9BRR3 403 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 CHST6Q9GZX3 395 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 ING3Q9NXR8 418 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 ZNF222Q9UK12 451 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 TRAV18A0A075B6X5 111 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 NKX6-3A6NJ46 265 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 PAX1P15863 534 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 GNB3P16520 340 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 MDH2P40926 338 aaKnown RBP16.19■□□□□ 0.18
USP39-218ENST00000493829 PLAC9Q5JTB6 97 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 OLFML2AQ68BL7 652 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 RAB12Q6IQ22 244 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 CLEC2AQ6UVW9 174 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 LYPD2Q6UXB3 125 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 LINC00596Q86U02 117 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 FAM89BQ8N5H3 189 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 NEK7Q8TDX7 302 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 CMTM3Q96MX0 182 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 NEDD4LQ96PU5 975 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 BPESC1Q9GZL8 116 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 PPA2Q9H2U2 334 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 MYOZ1Q9NP98 299 aaPredicted RBP16.19■□□□□ 0.18
USP39-218ENST00000493829 DIABLOQ9NR28 239 aa16.19■□□□□ 0.18
USP39-218ENST00000493829 TRAV24A0A0B4J272 114 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 SLC33A1O00400 549 aaPredicted RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 TMPRSS2O15393 492 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 PDCD6O75340 191 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 AMY2BP19961 511 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 CHATP28329 748 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 TAS2R20P59543 309 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 IL18Q14116 193 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 PAN3Q58A45 887 aaKnown RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 RNASE12Q5GAN4 147 aaKnown RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 SNX29P2Q8IUI4 249 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 SUMF2Q8NBJ7 301 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 FAM168AQ92567 244 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 GAFA1Q96PS6 74 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 PLEKHJ1Q9NW61 149 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 ELF5Q9UKW6 265 aaPredicted RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 A0A0G2JMP0 313 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 A0A0X1KG70 313 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 UBE2QL1A1L167 161 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 FOXI3A8MTJ6 420 aaPredicted RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 ADAM20O43506 726 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 CHRM2P08172 466 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 TMEM50BP56557 158 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 TMEM33P57088 247 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 ATXN7L3Q14CW9 347 aaPredicted RBP16.18■□□□□ 0.18
USP39-218ENST00000493829 FAM189A2Q15884 450 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 FAM131AQ6UXB0 335 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 ZNRF1Q8ND25 227 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 OR4M2Q8NGB6 313 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 PECRQ9BY49 303 aa16.18■□□□□ 0.18
USP39-218ENST00000493829 FAM90A10PA6NDY2 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A18PA6NE21 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A16PA6NEW6 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 TMEM235A6NFC5 223 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A20PA6NIJ5 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A8PA6NJQ4 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A7PA6NKC0 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A22PA8MWA6 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A12PA8MX19 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A5PA8MXJ8 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A23PA8MXZ1 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 XRCC3O43542 346 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 PSPNO60542 156 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A15PP0C7V4 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A13PP0C7W8 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A14PP0C7W9 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAM90A24PP0C7X0 464 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 HIST1H1DP16402 221 aaKnown RBP16.17■□□□□ 0.18
USP39-218ENST00000493829 SPANXN2Q5MJ10 180 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 Q6ZTK2 550 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 CCDC190Q86UF4 302 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FGFRL1Q8N441 504 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 TMEM185AQ8NFB2 350 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 SULT4A1Q9BR01 284 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 PIMREGQ9BSJ6 248 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 FAAP24Q9BTP7 215 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 DPCDQ9BVM2 203 aaPredicted RBP16.17■□□□□ 0.18
USP39-218ENST00000493829 ZNF665Q9H7R5 613 aa16.17■□□□□ 0.18
USP39-218ENST00000493829 TMEM82A0PJX8 343 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 FABP12A6NFH5 140 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 CEACAM18A8MTB9 384 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 SCGNO76038 276 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 FUT3P21217 361 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 CDNFQ49AH0 187 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 MUC20Q8N307 709 aaPredicted RBP16.16■□□□□ 0.18
USP39-218ENST00000493829 RCC2Q9P258 522 aaKnown RBP16.16■□□□□ 0.18
USP39-218ENST00000493829 MAB21L2Q9Y586 359 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 V9GYH0 126 aa16.16■□□□□ 0.18
USP39-218ENST00000493829 IGHV4-30-2A0A087WSY4 118 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms