RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 BATF2Q8N1L9 274 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 OR51A4Q8NGJ6 313 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 WIPF2Q8TF74 440 aaPredicted RBP7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 CORO2AQ92828 525 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 CNBD2Q96M20 576 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 Q96MT0 163 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 PPA2Q9H2U2 334 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 RHOFQ9HBH0 211 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 HMG20AQ9NP66 347 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 RAB18Q9NP72 206 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 INPP5EQ9NRR6 644 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 RBFOX1Q9NWB1 397 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 IL36RNQ9UBH0 155 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 AASSQ9UDR5 926 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 HHLA2Q9UM44 414 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 MYRFQ9Y2G1 1151 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 LINC00312Q9Y6C7 94 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 hADV38S2A0JD32 116 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 A6NDX4 124 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 FAM90A22PA8MWA6 464 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 E9PI62 339 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 H3BSH0 61 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 MGST3O14880 152 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 KDM4BO94953 1096 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ZFPL1O95159 310 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 HAND1O96004 215 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 DBTP11182 482 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 PIPP12273 146 aaPredicted RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 BCL3P20749 454 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 AZGP1P25311 298 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 PAX6P26367 422 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 GABRA5P31644 462 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 OR3A1P47881 315 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 BMXP51813 675 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ACTA2P62736 377 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ACTG2P63267 376 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 MRPL28Q13084 256 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 CCBE1Q6UXH8 406 aaPredicted RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 GDPD3Q7L5L3 318 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 LHFPL4Q7Z7J7 247 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 PARP16Q8N5Y8 322 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 DTX3Q8N9I9 347 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ASCC1Q8N9N2 400 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 Q8NFD4 153 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 OR4S1Q8NGB4 309 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 OR13D1Q8NGV5 346 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 RPS4Y2Q8TD47 263 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 JAM3Q9BX67 310 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 COMMD4Q9H0A8 199 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ISG20L2Q9H9L3 353 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 TCF7L1Q9HCS4 588 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 BLOC1S6Q9UL45 172 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
TMEM39A-210ENST00000490099 KIAA2026Q5HYC2 2103 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 A0A0G2JK05 382 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 J3QLW9 94 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 TSPAN15O95858 294 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 FADS2O95864 444 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 CSN2P05814 226 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 HTR1AP08908 422 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 GNAO1P09471 354 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 LIMS3P0CW19 117 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 LIMS4P0CW20 117 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 CGB3P0DN86 165 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 CGB7P0DN87 165 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF19P17023 458 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 COX7A1P24310 79 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 DUSP1P28562 367 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 CD34P28906 385 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 P2RX3P56373 397 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 LGALS4P56470 323 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ZP1P60852 638 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 DEFA6Q01524 100 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 RAB40BQ12829 278 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 PDLIM3Q53GG5 364 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 MINOS1Q5TGZ0 78 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 Q6P435 159 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF782Q6ZMW2 699 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 LHFPL3Q86UP9 236 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 APH1BQ8WW43 257 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 EMG1Q92979 244 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 FOXRED1Q96CU9 486 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 C4orf36Q96KX1 117 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF714Q96N38 554 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 NR1H4Q96RI1 486 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 MYCBPQ99417 103 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ALG8Q9BVK2 526 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 YTHDF1Q9BYJ9 559 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 NCOR1P1Q9H4R4 102 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 ZCCHC4Q9H5U6 513 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 LINC00574Q9H8X3 128 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 FGF20Q9NP95 211 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 SERTAD4Q9NUC0 356 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 TCF19Q9Y242 345 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 SIGLEC9Q9Y336 463 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 UBE2J1Q9Y385 318 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 SESN1Q9Y6P5 492 aa7.84□□□□□ -1.15
TMEM39A-210ENST00000490099 MINOS1-NBL1R4GNA1 71 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms