RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 IL12BP29460 328 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 KLF3P57682 345 aaPredicted RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 PRR22Q8IZ63 422 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 FNDC9Q8TBE3 224 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 GPR119Q8TDV5 335 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 RNF133Q8WVZ7 376 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 FGGYQ96C11 551 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 PNO1Q9NRX1 252 aaKnown RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 LAMP3Q9UQV4 416 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 OSGIN2Q9Y236 505 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 YLPM1P49750 1951 aaKnown RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 TRIOO75962 3097 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 PPP5D1E7EU14 171 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 CIDEAO60543 219 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 NDUFB8O95169 186 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 DDAH2O95865 285 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 OPN1MWP04001 364 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 OPN1MW2P0DN77 364 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 OPN1MW3P0DN78 364 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 CD33P20138 364 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC25A24Q6NUK1 477 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 NECAP1Q8NC96 275 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 NUDT10Q8NFP7 164 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF721Q8TF20 911 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 ALKBH7Q9BT30 221 aaPredicted RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 FAM206AQ9NX38 181 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 SPTBN5Q9NRC6 3674 aaKnown RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 F5P12259 2224 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 IGKV3D-11A0A0A0MRZ8 115 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 LOC101059948A0A1B0GTJ6 334 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 NPIPB13A6NJU9 1138 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 NPIPB4C9JG80 1138 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 SDCBPO00560 298 aaPredicted RBP10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 NUDT14O95848 222 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 OR3A2P47893 321 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TFF2Q03403 129 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 CLEC12BQ2HXU8 276 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 Q7L0L9 218 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 GRINAQ7Z429 371 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 OR13G1Q8NGZ3 307 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 MRPL24Q96A35 216 aaKnown RBP10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 AK3Q9UIJ7 227 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 A0A1W2PN81 502 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 CDC14CA4D256 554 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 C17orf51A8MQB3 221 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TDGF1P13385 188 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 PTGER4P35408 488 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 CHRNA7P36544 502 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 RAB11AP62491 216 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 ZFP36L1Q07352 338 aaKnown RBP10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TAF9Q16594 264 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 CHRFAM7AQ494W8 412 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF506Q5JVG8 444 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 CMTM1Q8IZ96 169 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 OR2G3Q8NGZ4 309 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 MRGPRDQ8TDS7 321 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 ASB10Q8WXI3 467 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 ACY3Q96HD9 319 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC35E1Q96K37 410 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 ANGPTL4Q9BY76 406 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TBL1XR1Q9BZK7 514 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM242Q9NWH2 141 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM150CB9EJG8 249 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 TTRP02766 147 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 H2BFMP0C1H6 154 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 CAPZBP47756 277 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ERVS71-1P61550 626 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 RPL23AP62750 156 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ZP4Q12836 540 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 KMT5CQ86Y97 462 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 SNIP1Q8TAD8 396 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 LOC105371242A0A075B767 164 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 SPTY2D1-AS1A0A0U1RR47 76 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 E5RGE8 158 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 RBMXP38159 391 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF542PQ5EBM4 170 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 LINC00346Q8IVM7 164 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM123Q8N131 208 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF2Q9BSG1 426 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 NICN1Q9BSH3 213 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 GPR35Q9HC97 309 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 GPR27Q9NS67 375 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF581Q9P0T4 197 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 FUT9Q9Y231 359 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 NSG2Q9Y328 171 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 PAM16Q9Y3D7 125 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 M0QZ24 198 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 GPR137BO60478 399 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 GZMHP20718 246 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 DAP3P51398 398 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 TOMM20LQ6UXN7 152 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms