RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MAGEA2P43356 314 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 OR3A1P47881 315 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 HCCSP53701 268 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 P2RX3P56373 397 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 RAB25P57735 213 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 ESRRGP62508 458 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 ROM1Q03395 351 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF91Q05481 1191 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 GRK1Q15835 563 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 MICAQ29983 383 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 HLA-DRB5Q30154 266 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 DEFB136Q30KP8 78 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 TPTE2P1Q5T6R2 138 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 C9orf66Q5T8R8 295 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 CCDC144NLQ6NUI1 221 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 DEGS2Q6QHC5 323 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 CD300LDQ6UXZ3 194 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 Q6ZSR3 168 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 RTN4RL2Q86UN3 420 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 SBSPONQ8IVN8 264 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF679Q8IYX0 411 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 COMMD1Q8N668 190 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 C5orf56Q8N8D9 126 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 BBS1Q8NFJ9 593 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 OR52N4Q8NGI2 321 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 OR5M8Q8NGP6 311 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 OR14K1Q8NGZ2 314 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 TEX47Q8TBZ9 253 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 SLAMF9Q96A28 289 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 CMTM5Q96DZ9 223 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 CEP19Q96LK0 163 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 NIPSNAP1Q9BPW8 284 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 CADM1Q9BY67 442 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 SEBOXQ9HB31 216 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF286AQ9HBT8 521 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 PAPOLBQ9NRJ5 636 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 MTCH1Q9NZJ7 389 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 LINC00527Q9UJ94 153 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 UBE2J1Q9Y385 318 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 SAMHD1Q9Y3Z3 626 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 U3KQV3 271 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 V9GYS6 101 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 DNAH2Q9P225 4427 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 KIAA2026Q5HYC2 2103 aa4.03□□□□□ -1.76
SNRNP40-204ENST00000474025 A0A1B0GTI1 187 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 FAM230AA0A1W2PPH8 454 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ARRDC5A6NEK1 342 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SERPINE3A8MV23 424 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 OOSP1A8MZH6 123 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 LOC110117498-PIK3R3F6TDL0 507 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 H3BN98 237 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 BUB1B-PAK6H3BSN5 160 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 MGST3O14880 152 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 FGF16O43320 207 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF254O75437 659 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 E2F6O75461 281 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 IGHG2P01859 326 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 PEX2P28328 305 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ERP29P30040 261 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CEACAM3P40198 252 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 MNDAP41218 407 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 RIDAP52758 137 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC35B1P78383 322 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 FHL3Q13643 280 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 APOFQ13790 326 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 KIR2DS1Q14954 304 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF146Q15072 292 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF829Q3KNS6 432 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC35D3Q5M8T2 416 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 UTF1Q5T230 341 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 BCL2L15Q5TBC7 163 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SLX4IPQ5VYV7 408 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ZFAND6Q6FIF0 208 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 LCNL1Q6ZST4 164 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC35E3Q7Z769 313 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 TRAPPC6BQ86SZ2 158 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CPOQ8IVL8 374 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 STPG2Q8N412 459 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 RNF152Q8N8N0 203 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 OR10G2Q8NGC3 310 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 OR8U1Q8NH10 309 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 OR56B4Q8NH76 319 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 TRMT10AQ8TBZ6 339 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CORO2AQ92828 525 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 EMG1Q92979 244 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CREB3L1Q96BA8 519 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CDRT15Q96T59 188 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 MROQ9BYG7 248 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 TTTY10Q9BZA0 68 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 YIPF3Q9GZM5 350 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 GAL3ST2Q9H3Q3 398 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 CCDC134Q9H6E4 229 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 DCLRE1BQ9H816 532 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 PCDHB16Q9NRJ7 776 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms